<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29853
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MDSQPSAARGTLQEAVKYWSDFVARCIVQRLDSNRFQDFVQLVHARHPLPPVLIADLFLRPQPSNRVSLDPRIPPYVRILAQLRYVDAPSILRVLYKYSALHAHDRPPLPLPSSLPENGGDGETMKKEEEEEKGAGGGGVMRQDKMVRWQESAWAEEVLFYHVIKTMFEGTAFTDAKTGLELVDITCKWMDLFVHASSELAADMLANKHDRQARDEMETVRAALVPLLLRLVDNHELLRIISKPFAKGIRKHLSESLGNFIQTVQPPPLYIERLEIFRTQTLAQLDPIDEKKKAANAAMEELLDSTVGSDNFVVPDILISNSRAALYVYLNAALVARPVLDDSMLYAFLSNKYQENQQASAVDLIVASFDVLANAVFRNEGPRDAHLLRSFVVNKLPLLLCQLCHPEFSAASAEFCITEALSRVDTGIFPTASLMFDESRNNNPYMDSVREEFCAACALHGLIERDHVDRILGETSMSYDPSLERANRDRLVSDCLSDSGRIQNIISQLDRVDGNVGAVAHAIVELIRQLCNNKDTTSLKLLCLQLSQKPQSLDIILLFDKVTSVLEPVCTLLDNWNYEEDQGEYQPVYEEYGAILLLVFAFTYRYNLSPLDIGIQSADSHVAKIIAKSHMLRPLEDLNEQEAEHVAGWITGLFDNETGGLGDDLMSSCPPHEFYLLVAPIFQSIITAYTYGYINDESLKGGVEYLVDTFLLPSLVPAIRFLSDYIWIDEKEQKSIVKALQLLLTPSSISGEASTVLSAVKNLIAQPLEHALRTYQRQDPRNQDIEPLLRSLKENLPLSRRTGGPEHHEMVSWANNSNSGLSGAIRHTIQGLVQWSLQPGVNVMPTSYTHRQLITGLRIIGPSRLLRLIMEEVRQQSELGNASIVYDVAAALIAATDPTNEAPPGPNLLDTAGTMQATPPPQRPQGLREALKTAAEGCKRLQKHDQFLAEATVRLHRRVEMLLVVPQPQAMLQTTDMPLDLGGDAMAAAAAAAAAVGADPMSVDGLDTTGLDTTGLDLGLGADMGLSGGGSDGDLFGGLDTSLDMFDGWDSMDMGVN |
Length | 1057 |
Position | Tail |
Organism | Beauveria bassiana (strain ARSEF 2860) (White muscardine disease fungus) (Tritirachium shiotae) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Cordycipitaceae> Beauveria.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.131 |
Instability index | 43.92 |
Isoelectric point | 4.93 |
Molecular weight | 116807.74 |
Publications | PubMed=22761991
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364142
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP29853
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 92.29| 29| 36| 977| 1012| 1
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977- 1012 (39.14/36.83) MPLDLGGDaMAAAAAaaaavGADPMSVDGLDTTgLD
1016- 1044 (53.14/28.95) LDLGLGAD.MGLSGG.....GSDGDLFGGLDTS.LD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 85.92| 27| 36| 415| 450| 2
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415- 442 (45.49/50.75) FCITEAL......SRVDTgIFPTASLMFDES..RNN
453- 487 (40.43/20.49) FCAACALhglierDHVDR.ILGETSMSYDPSleRAN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 68.18| 16| 37| 691| 706| 3
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689- 704 (25.83/17.49) YT..YGYINDESLKGGVE
705- 720 (22.69/14.42) YL..VDTFLLPSLVPAIR
721- 738 (19.66/11.45) FLsdYIWIDEKEQKSIVK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 219.47| 73| 230| 278| 357| 4
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282- 357 (109.24/110.95) LAQLDPIDEKKKAANAAMEELLDSTVGSDNFVVPDIL...ISNSRAALYVYLNAALVArPVLDDsmLYAFLSN.KYQENQ
506- 582 (110.23/86.50) ISQLDRVDGNVGAVAHAIVELIRQLCNNKDTTSLKLLclqLSQKPQSLDIILLFDKVT.SVLEP..VCTLLDNwNYEEDQ
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