<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29804

Description Thioredoxin
SequenceMARIRVDIYSDTGCPWCYIGNKYLDLAIEQYSIRHPDAVFELAWHPFFLFPNAKVSGYNRADLYHKIMGPDRAAGWFRSLDAAAGPLGIRFDWSGRTGHTSDSHKLLLRASDLGRAASLRIGGGLLQQQQQQQQQQQQQQQQQQQQQQQQQQPGTAADQPSSDDGEATSYPSPPRDDGDDDDDDGEDGDDDDEDGDDDRGDDNNTNNTNNTNTNYNHSNNSAPLRRLLRHVFEGSFERGRDVSDRAFLAEAAVAAGVAADTADALGWLDHPGSAARLAAGTATASAGAPGVAAVPSFVVQGKFKVGGAQPPDVFLALFDRLGGEGKA
Length327
PositionTail
OrganismGaeumannomyces graminis var. tritici (strain R3-111a-1) (Wheat and barley take-all root rot fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Sordariomycetidae> Magnaporthales> Magnaporthaceae> Gaeumannomyces.
Aromaticity0.08
Grand average of hydropathy-0.761
Instability index39.85
Isoelectric point4.60
Molecular weight35371.79
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
oxidoreductase activity	GO:0016491	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29804
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.22|      18|      18|     247|     264|       1
---------------------------------------------------------------------------
  247-  264 (29.13/14.94)	FLAEAAVAAGVAADTADA
  267-  284 (32.09/17.10)	WLDHPGSAARLAAGTATA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.45|      19|      19|     148|     166|       3
---------------------------------------------------------------------------
  127-  145 (31.25/12.18)	QQQQQQQQQQQQQQQQQQQ
  148-  166 (32.91/13.19)	QQQQQPGTAADQPSSDDGE
  168-  184 (23.30/ 7.36)	..TSYPSPPRDDGDDDDDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.73|      23|      37|      65|      87|       4
---------------------------------------------------------------------------
   65-   87 (42.41/25.16)	HKIMGPDRAAGWFRSLDAAAGPL
  104-  126 (37.31/21.31)	HKLLLRASDLGRAASLRIGGGLL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29804 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SLRIGGGLLQQQQQQQQQQQQQQQQQQQQQQQQQQPGTAADQPSSDDGEATSYPSPPRDDGDDDDDDGEDGDDDDEDGDDDRGDDNNTNNTNNTNTNYNHSNNSAPLRRLLRHVFEGS
118
235










Molecular Recognition Features






MoRF SequenceStartStop




1) FLALFDRL
314
321