<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29778
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MGGEGDSYLALRELVEKSRVEAEGKNGQQRSDTEKKIDLLKFIDRTRQRMLRLHVLAKWCQQVPLVHYCQQLASTLSSHETCFTQTADSLFFMHEGLQQARAPIFDVPSAIEVLHSGSYRRLPKCVEEIGTQNTLFQDEQKPTLKKLNTLVRTKLLETSLPKEISEVSVTDGIANVQVDGEFKVLITLGYRGHFSLWRILHMELLVGEKTGPIKLEETRRYALGDDIERRMAVADNPFMILYTILHELCISLVMDTVIRQTNALRQGRWKDAIKSELISDIHSGGGQGGNSALMQLGQEGELDSSGSRIPGLKINYWLEEKTNASAELDSSPFIKIEAGQDMQIKCQHSSFVLDPFTDKEADLSIDLSCIDVEAVILKAIACNRHTRLLEIQRELIKNVQMSQSRTEVILKQEVHGVGFQKKAHRSDSDDCCTNEMLQVRAYGQSYIHLGINIRNGRFLLQSPGNILPPSAVLESEEALNKGSTTATDVFVSLRTRSILHLFAATGSSLGLKVYSQSQVTLKIPKSILYGSDFMVMGFPQCANAYYLLMQLNNSFQPVFHLLEIQSNEGDKNNADASTDAKEVIRFIRIDINKLKVDEDLQIGSLFDKDKLLALPNVEDRPQRLSGPDELLPARPSFSSVVDEVFGFDTGSPKTENQRLPSYNLPSSHSSYQVGLHGANGGAGSPVKDYGSLQSNINSAKVTSSISLNNYLLNNSKHAQSTTALFGSVPAGSGNISSSRPEGASIKRSLSEFLRNIPPLKQSDGPSKRRNMPESMLDGLPLKAHSPNMQPGTTLTYGKLLEEVNSCITANIYSSVLLHVIKHCSICIKYAQLTAQMDSLNIPHVEEAGLRTPSSNLWLRLPFAHDASWKHICLRLGKAGSMSWDVRINDPHYGALWKLHGGSTSTEWGSGVRVANTSEVDSHISFDDDGVLLTYNTVEADSVQRLVSDLQRLSNARAFSCGMRRLIGVKLDDELVENQAAAEKKLQSRRNACRDRLSEQMRKTFRIEAVGLMSLWFSYGVVPMVYFVVEWEAGKSGCTMRVSPDQLWPHTKFFEDFVNGDEVASFLDCIRLTAGPLLALGGAIRPAKMPVTVPAVYSVVPKQNNILSTVGSANSSLPSSVHNMSVPQGAAVAHANSHLQTSSMLSAAGRTAPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNALEPNLLSARHTGPQLNASASTVSGSQQLTPTPNRFGGAPGVARPTSSVGNQVATSLSRAGNAMMASGFPSGIAGSPAHLSPANNIPAYMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILKDNEGALLNLDHEQPALRFFVGGYVFAVSVHRVQLLLQVLNVKRFHHQQQQQQQQQQAPQSNNGQEELTASEISEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFIKLIAWKKNLSQAHGDNATAQRARIELCLEKHPRLVSDDYTSSSSSKSNIHHDRANNSVDFALTFVLDHALVPQMSISGGAAWLPYCVSVRVRYTFGDNSHIAFLAMDGSHSGRACWLQHEDWERCKQRVSRAVETMNGSAAVGDMSQGRLRMVAEMVQKQLQLSLVQLRDGPGSAAS |
Length | 1668 |
Position | Tail |
Organism | Oryza brachyantha |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.219 |
Instability index | 51.08 |
Isoelectric point | 7.89 |
Molecular weight | 183295.68 |
Publications | PubMed=23481403
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP29778
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.84| 14| 231| 675| 696| 1
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650- 664 (21.29/15.40) GSPKTENQRLPSyNL
683- 696 (25.55/ 7.02) GSPVKDYGSLQS.NI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.57| 19| 231| 1309| 1343| 2
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1287- 1305 (33.45/13.37) LSRAGN..AMMASGFPSGIAG
1310- 1330 (29.12/34.03) LSPANNipAYMKGELNTAFIG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 201.13| 62| 68| 1022| 1089| 3
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1022- 1089 (101.55/94.13) PMVYFVVEweagKSGCTMRV..SPDQLWPHTKFFEDFVNGDEVASflDCIRLTAGPLLALGGAIRPAKMP
1093- 1156 (99.57/73.13) PAVYSVVP....KQNNILSTvgSANSSLPSSVHNMSVPQGAAVAH..ANSHLQTSSMLSAAGRTAPGLVP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.54| 32| 37| 318| 354| 4
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322- 354 (50.67/54.49) TNASAEL..DSSpFIKIEAGQDMQIKCQHSSFVLD
357- 390 (48.87/33.88) TDKEADLsiDLS.CIDVEAVILKAIACNRHTRLLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.98| 25| 35| 122| 150| 5
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122- 150 (38.54/46.20) LPKCVEEI....GTQNTLFQDEqkptLKKLNTL
160- 188 (36.44/29.66) LPKEISEVsvtdGIANVQVDGE....FKVLITL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.95| 21| 23| 739| 760| 6
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734- 754 (33.24/17.24) NISS.SRPEGASIKRSLSEFLR
755- 776 (34.71/22.83) NIPPlKQSDGPSKRRNMPESML
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 33.50| 10| 23| 1347| 1356| 7
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1347- 1356 (16.81/ 9.54) LKKVLRGILK
1371- 1380 (16.69/ 9.42) LKEILGSILK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 284.56| 86| 672| 488| 578| 9
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488- 578 (131.23/100.97) DVFVSLRTRSILHLFAATGSSLGLKVYSQSQVTLKiPKSILYGSDFmVMGFPQCANAYYLLM....QLNNSFQPvfHLLEIQsNEGDKNNADAST
1163- 1252 (153.33/97.33) DVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQ.PATPPKGGPS.VGGSLPCPQFRPFIMehvaQGLNALEP..NLLSAR.HTGPQLNASAST
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.13| 20| 25| 864| 887| 10
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864- 887 (29.23/26.23) H.DASWKhicLRlGKAGSMSW..DVRI
891- 913 (29.90/13.78) HyGALWK...LH.GGSTSTEWgsGVRV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.69| 28| 225| 697| 724| 11
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697- 724 (45.72/33.36) NSAKVTSSISLNN...YLLNNSKHAQSTTAL
915- 945 (41.97/29.94) NTSEVDSHISFDDdgvLLTYNTVEADSVQRL
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