<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29749
Description |
Uncharacterized protein |
Sequence | MDGDGGVHDGIWSARCSVSSSSGSLLDAADDWDEQSLAADEDKVFVAVEADVEHGRSTFLWALQNLAARGSKIVVAHVHSSAQEISKIHCTSMKPEEISEYLKLAREEAEKNLDEYALIAKSTGKDMEIACEKVIIVMDDIAKGLEELITLHGITRLVMGAAADQYYSEEMKEPNSKIALKLMETASPSCKIWFTCNAHLICTREPNENLLAIYVPPAQTNTKPLSVCSISSQMSSIELENEAPSSEEYTLRSLVQSTMSEWDYIFGDWGRIGYGSFRTDDPISISEATTLAVIVDGTNKQSSVMHSPQESDSVNFLLPVCDPEQEEEEQNLYDDMRGKLKEACTRAELLKEEVHSESSKRRKAEMDLLIALQRVKESEKLYLQEGNQRKETEKTLARQRLEIDEIKRRHNALYDELQDTKKQKLVLEQHISEIKSAATDYVQKITEYFIQESCEEAKKRQKIKMDLLAVLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYHELKDVKEQKFSLEQVDASEETRRRRKAESDMLSALQRVHGLEHQYLHELKKREALDETLARQREEIQETKRELNKINGIHMTEIKSIRKVHEEKLAESKRFIQEIQAKYDKLLHERDTAIAESEKLRQMNRNGASITATTQIPDFSFFELRQATQDFDTALKIGTGRFMSVYKGFLRNTAVTVTLLHHQGLQGQSEFHQEVAVLSRLRHPNLMTLIGACPEAFGMVYEFLPNGSLEDQLSCEKNTPPLTWKARTRIIGEICSALTFIHSHKPHPVVHGNLNPMNILLDANFVSKLHICQILRKYNTGNNTYGTSSYIDPEFLSTGELAPRCDVYSFGIIILRLLTGQPPENITTMVEDAMEKSQLHSIMDTSAGSWPFVQANQLAHLGLRCANLSGRHRPDLTGEVWGVIKPLLKAAYQNHGCKHTFEALSDETHMPSYFICPILQEVMTDPHIAADGYTYEADAIREWLDGGNARSPMTNLRLEHRELTPNRVLRSAILEWRHQQQQHKR |
Length | 1025 |
Position | Tail |
Organism | Oryza brachyantha |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.567 |
Instability index | 50.81 |
Isoelectric point | 5.67 |
Molecular weight | 116965.21 |
Publications | PubMed=23481403
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Function
Annotated function |
Functions as an E3 ubiquitin ligase.
ECO:0000256 ARBA:ARBA00003861
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GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:InterPro
protein kinase activity GO:0004672 IEA:InterPro
ubiquitin-protein transferase activity GO:0004842 IEA:InterPro
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GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP29749
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
6| 149.09| 25| 25| 391| 415| 1
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365- 382 (18.99/ 8.02) ..................................................EMDLLIALQR.........VKESEK.LY
390- 414 (42.60/27.62) K.................................................ETEKTLARQRL....EIDEIKRRHNALY
415- 439 (21.48/10.08) D.................................................ELQDT.KKQKLvleqHISEIK...SAAT
440- 513 (17.65/ 6.90) DyvqkiteyfiqesceeakkrqkikmdllavlqrvkdvenlnrnekmqrkDMEEKIARQRM....EIEETKRQRDELY
570- 591 (29.38/16.64) ....................................................DETLARQRE....EIQETKRELNKIN
592- 626 (18.99/ 8.01) G......................................ihmteiksirkVHEEKLAESKR....FIQEIQAKYDKL.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 453.42| 146| 179| 640| 792| 2
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640- 792 (228.13/171.84) LRQMNRNGASITATTQI.PDF.SFFEL..RQATQDFD.TALKIGTGRFMSVYKGFLRNtAVTVTLLH..HQGLQGQSEFHQ..EVAVLSrLRHPNL..MTLIGACPEAFGMVYEFLpNGSLEDQlSCEKNTPPLTwkARTRIIGE.ICSALTFIHShKPHPVVHG
815- 972 (225.29/141.88) LRKYNTGNNTYGTSSYIdPEFlSTGELapRCDVYSFGiIILRLLTGQPPENITTMVED.AMEKSQLHsiMDTSAGSWPFVQanQLAHLG.LRCANLsgRHRPDLTGEVWGVIKPLL.KAAYQNH.GCKHTFEALS..DETHMPSYfICPILQEVMT.DPHIAADG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.33| 16| 28| 32| 47| 3
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32- 47 (29.13/17.72) WDEQSLAADEDKVFVA
61- 76 (28.20/16.95) WALQNLAARGSKIVVA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.34| 14| 211| 16| 29| 4
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16- 29 (24.98/17.02) CSVSS..SSGSLLDAA
228- 243 (20.37/12.49) CSISSqmSSIELENEA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.02| 27| 77| 452| 478| 5
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452- 478 (44.86/24.68) ESCEEAKKRQKIKMDLLAVLQRVKDVE
530- 556 (44.16/24.20) DASEETRRRRKAESDMLSALQRVHGLE
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