<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29744

Description Uncharacterized protein
SequenceMVETVVLEGDGVAEALVRYAADSGVRSLVLGSASLGWFRRAMNIPDVATAVLKTTEISCNVFVVSKRRLTLKVIRHPQTSKSGTGLRIQSVSQKAFAKSYRSLLFDNFPEEHRHSDSCCQSRISHRGPTNARQSSESHGNITLKSLLAKTAGIEGYKNHGFQSPFKEAHRADSNSSEECQSIDEVAKLRKELQDTLVMYDKACEDLVHAKKKIQVLSNERSEEARKVEHALQEEALKQVVADEEAKHLEAIEEVEQAKKSFTREAYSRKKAEMVASMVSVDKAKVVDAILSTSKNCRRYKKHEIELATDNFSESRKIGEGGYGNVYRGTLDHTEVAVKVIQQDSIDKTDEFLREVDILSQLQHPNLVLLLGFCPEIGCLVYEYLQNGSLEDQLLNNKGRQPLHWFLRFKIIIDVSRGLLFLHGRKPEPIVHRDLKPANILLDKNYVGKIGDVGFAKLISDLVPEWQTEYKETIIAGTLYYMDPEYQQTGTVRPKSDLFALGVIILQMLTGKRPNGLIVSTENAIRNGTLADILDKSQTDWPLAEAEMLARLGLRCTALKCRARPGLETEVLPKLQEILNRITSSTVNVRSPKLNVPSHFICPIMLEVMNDPYVAADGHTYEQQAIKAWLKKHKVSPVTRRVLPDSSVIPNHSLRAAIQQWMSQSAHAKA
Length669
PositionTail
OrganismOryza brachyantha
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.356
Instability index50.29
Isoelectric point8.63
Molecular weight74994.02
Publications
PubMed=23481403

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29744
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.27|      22|      24|     544|     567|       1
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  546-  567 (39.14/31.29)	EMLARLGL...RCTALKCRAR.PGLE
  569-  594 (27.12/13.04)	EVLPKLQEilnRITSSTVNVRsPKLN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.06|      37|      54|      75|     112|       3
---------------------------------------------------------------------------
   75-  112 (59.22/46.94)	RHPQTSKSGTGLRIQsVSQKAFAKSYRSLLFDN.FPEEH
  132-  169 (57.85/40.78)	RQSSESHGNITLKSL.LAKTAGIEGYKNHGFQSpFKEAH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.92|      21|      28|     393|     413|       4
---------------------------------------------------------------------------
  393-  413 (40.01/25.39)	LLNNKGRQP...LHWFLR.FKIIID
  418-  442 (27.91/15.72)	LLFLHGRKPepiVHRDLKpANILLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.26|      19|      23|     214|     234|       5
---------------------------------------------------------------------------
  214-  232 (29.40/24.76)	QVLSNERSEEARKVEHALQ
  238-  256 (28.86/16.19)	QVVADEEAKHLEAIEEVEQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29744 with Med32 domain of Kingdom Viridiplantae
Unable to open file!