<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29718

Description "Pb, isoform D"
SequenceMQEVCSTLDTTPMGTQIKSESPLNPLQVQTGGQTALPVGVGVGGLVGQGTQQGAPAVPAVMLVNKMASNCDKRAADTAYWMAASEGGFINSQPSMAEFLNHLSPESPKMGTPVGGGGGGGVGVGGGVNVNVNVGVGYPVGVGPMPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSIKNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGSLTPNSSLETGISSNLLGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDENQVIKKEAVSTSSKASPFGYESSTPSLVSFRRDSDAVIASANPPPTKGKKRYQNNANSIATPTPLTDSSSGGNVGAGGGGGASAGGYFPGYYPSPKQQMQQQQQLHPQQQQQQPQPQDYYGKYDIEFAASPHHNNPHKQQSLHAGEYLSPKPNAATFHQNSQQQQQHEQQFYYNYNDANGSAYMNHQQQQQQQHHHVGDFETPPINGPSNFNSGYYDNMSFQHQAQAQAHQQHQSVVFQQQQQHQQAPINHQQHMHHLGTGEAYSALGLQMENCDGYNNFGGPGSAGAGSAGAGVGVGYYEAGQQPPVPPHTHTHTHHPHHHVQVQAQAHDHLHAHHNPAAAAVQAGVGVGVGVGVGVGVVPPPPPPSHIHGFALNGGGQAVQSQAFVSGGGSAGGAAAISGLENSNSSSDFNFLSNLANDFAPEYYQLS
Length796
PositionKinase
OrganismDrosophila pseudoobscura pseudoobscura (Fruit fly)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.784
Instability index54.71
Isoelectric point6.20
Molecular weight84582.17
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29718
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     441.41|      78|      79|     472|     549|       1
---------------------------------------------------------------------------
  352-  407 (53.83/14.88)	..................DIE.ESSPIKVKKKDENQ....VIKKE.............A..VSTSSKA.SPFGYESS....TPSL..VSFRRDSDA.....VIASA.
  409-  475 (51.27/13.85)	........PPPTKGKKRYQNN.ANSIATPTPLTDSSsggnVGAGGgggasaggyfpgyY..PSPKQ.......QMQQ....QQQLHPQQ..................
  476-  549 (134.23/46.93)	....QQQQPQPQDYYGKYDIEFAASPHHNNPHKQQS....LHAGE.............Y..LSPKPNA.ATFHQNSQ....QQQQHEQQFYYNYND.....ANGSAY
  552-  630 (97.67/32.36)	HQQQQQQQ...HHHVG..DFE...TPPINGPSNFNS.......GY.............YdnMSFQHQAqAQAHQQHQsvvfQQQQQHQQAPINHQQhmhhlGTGEAY
  665-  706 (59.75/17.24)	YYEAGQQPPVPPHTH.....THTHHPHH...HVQVQ....AQAHD.............H..LHAHHNP.A.....................................
  730-  764 (44.66/11.22)	.......PPPPSHIH.......................................................GFALNGG....GQAVQSQAFVSGGGS.....AGGAA.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     173.53|      51|      80|       8|      81|       2
---------------------------------------------------------------------------
    8-   58 (94.19/34.14)	LDTTP.MGT...QIKSESPLNPLQVQTGGQTALPVG........VGVGGLVGQG....TQQGAPAVP
   89-  155 (79.34/52.48)	INSQPsMAEflnHLSPESPKMGTPVGGGGGGGVGVGggvnvnvnVGVGYPVGVGpmpqTPDGMDSVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.56|      13|      56|     652|     664|       3
---------------------------------------------------------------------------
  652-  664 (25.68/13.03)	AGAGSAGAGVGVG
  707-  719 (24.88/12.39)	AAAVQAGVGVGVG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.72|      22|      76|     159|     181|       4
---------------------------------------------------------------------------
  159-  180 (39.29/25.90)	WMKEKKTSRKSSNNNNQGDNSI
  290-  311 (34.42/16.66)	NSRGHNNNTPSATNNNPSAGSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.21|      15|      15|     251|     265|       5
---------------------------------------------------------------------------
  251-  265 (26.67/16.48)	EDNKDSLKG....DDDQSD
  268-  286 (22.53/12.74)	SNSKKSCQGcelpSDDIPD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29718 with Med12 domain of Kingdom Metazoa
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