<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29711

Description Uncharacterized protein (Fragment)
SequenceMQSALEESIKYVQKVQSLTINNESKAESVPFYKATNEDDQDWSMLVDDNAIVNDDDFDFFDESPKTATTQQTPITPFTPATPSIHYSFVDHTLEEFQMQPTNGVIPNGYQQLAFNRAISLVNYSANGKYAVEEGIQSRASYPPHWYESLSRPHLTRRKKKEKEKDSRMTFTKVIHDRSATPSSSSEYEIDEDAFINSSDDDFDIDTNLSVPPTPMTLHSNGSRLSEGAPEIVIQLSDEDRVLLSNISWSSAPKGYNIKFTPQDITSQYLTQPKLALGYDNQVIHTLPHGMQYWEKAGFTPFGGKKNITVSIEGQRTELREAFFDTFRDMYTICNFGTVSVLHRQATLPDEHTVVFEITDVDFSTHLPRARQASQEGHTFQLLSSQEIQEVISSRDAARGLAIRIYDRIKLVVQKWAPKSQQLHQSVEAQSFDFPAFVIARNGISRDQIAIAAGIASAFNYHRKLHIAYIHLSSNRLLIVSIDEYSHFHDVQLVDKVGRTSKQTILEYFKVFELETSIRWSVRVITPSAIPNDDELGDWKATNADDLDLHFYTFNTLEGKHDANKADYGWEDNLNYATINSGCNRVLKITNHSTTINHNFENYIQSLHNLSFITKYKKHPRN
Length621
PositionKinase
OrganismWallemia mellicola (strain ATCC MYA-4683 / CBS 633.66) (Wallemia sebi (CBS 633.66))
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Wallemiomycotina> Wallemiomycetes> Wallemiales> Wallemiaceae> Wallemia.
Aromaticity0.10
Grand average of hydropathy-0.551
Instability index39.45
Isoelectric point5.53
Molecular weight70792.85
Publications
PubMed=22326418

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29711
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     304.13|      95|     143|      46|     145|       1
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   46-  145 (153.99/98.71)	VDDNAIVN..DDDFDFfDES...PKTATTQQTPITPFTPATPSIHYSFVDHTlEEFQMQPTNGVIPNGYqQLAFNRAISLVNYSANGKYAVeeGIQSRASYP.PH....W
  189-  293 (150.14/80.77)	IDEDAFINssDDDFDI.DTNlsvPPTPMTLHSNGSRLSEGAPEIVIQLSDED.RVLLSNISWSSAPKGY.NIKFTPQDITSQYLTQPKLAL..GYDNQVIHTlPHgmqyW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     135.14|      32|     475|      12|      43|       2
---------------------------------------------------------------------------
   12-   43 (54.90/35.77)	VQKVQSLTINNESKAESVPFYKATN.EDDQDWS
  490-  520 (41.65/25.44)	VQLVDK..VGRTSKQTILEYFKVFElETSIRWS
  521-  547 (38.59/23.05)	VRVITPSAIPNDDELGD...WKATN.ADDLD..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.55|      29|      52|     393|     422|       4
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  393-  422 (46.90/37.68)	SRD...AARGLAIRI.YDRiKLVVQKWAPKSQQL
  444-  476 (41.64/28.15)	SRDqiaIAAGIASAFnYHR.KLHIAYIHLSSNRL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29711 with Med13 domain of Kingdom Fungi
Unable to open file!