<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29702
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MATATYPPPPPYYRLYKDYVQDPESAPEPPPPIEGTYICFGGSYTTSDVLPSLEEQGVRQLYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIERRKQAAEDINRRREEARRILNESLATLDGH |
Length | 168 |
Position | Middle |
Organism | Medicago truncatula (Barrel medic) (Medicago tribuloides) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.642 |
Instability index | 88.60 |
Isoelectric point | 6.08 |
Molecular weight | 19354.69 |
Publications | PubMed=22089132
PubMed=24767513
PubMed=30397259
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP29702
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.81| 10| 19| 7| 16| 1
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7- 16 (24.59/13.09) P.PPPPYYRLY
27- 37 (19.22/ 8.80) PePPPPIEGTY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.45| 40| 44| 58| 100| 2
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58- 100 (63.50/45.35) VRQLYSKGPNI.DFKKELRSLNGELQL.HILELAdilIERPSQYA
103- 144 (56.94/33.46) VEEISTVFKNLhHLLNSLRPHQARATLiHILELQ...IERRKQAA
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