Description | Uncharacterized protein |
Sequence | MTAAPASPQQIRDRLLQAIDSQSNIRNMVAVLEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEPVHQNEAALRGLAGAAGSANGGAHNCRPEAGTAGTPKSIHDLKNRNDIQRLPGQRLDRLGSRKRRGDQRDLGHPGPPPKVSKATHDPLVPNSSPLPTNGISGSPESFPSPLDGSGHSGSEGSRLEPSENDKHSSKIPVNAVRPHTSSPSLGKSPGPCLQTKASVLQQLDRVDETPGPPHPRAPPRCSFSPRNSRHEGSFARQRSPYAPKGSVPSPSPRPQSLDATQVPSPLPLAQPSTPPVRRLELLPSTDSPMRWLEQSEGHQRLVGPGCKAGLLPAESLLSRAGFSPDSSKADSDAASSGGSDNKKKKRYRPRDYTVNLDGQMAEAGVKPVRLKERKLTFDPMTRQIKPLTQKEPVRADSPVHTEQPPRTELDKQEAKASLQSPFEQTNWKELSRNEIIQSYLSRQSSLLSSSGAQTPGAHHFMSEYLKQEESTRRGARQPHVLVPHGPPTDLPGLSREVTQDDLDRIQAHQWPGVNGCQDTQGNWYDWTQCISLDPHGDDGRLNVLPYVSLD |
Length | 600 |
Position | Unknown |
Organism | Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Glires> Rodentia> Sciuromorpha> Sciuridae> Xerinae> Marmotini> Ictidomys. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.900 |
Instability index | 63.71 |
Isoelectric point | 9.51 |
Molecular weight | 65646.73 |
Publications |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP29692 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 505.05| 107| 110| 158| 264| 1 --------------------------------------------------------------------------- 139- 240 (152.92/48.38) ...........QRLD.RLGSRKRRGDqrdlgHP...GPP...P...KVS....K.ATHD.PL.VPNSSPL....PTNGISGSP...ESFP.SPLDGSGHSGSEG...SRLEPSENDKHSSKIPVNAVR..PHTS.SPS..LGKSPG 241- 347 (131.69/40.79) PCLQTKAS.VLQQLD.RVDETPGPPH.........pRAP...P...RCSfsprN.SRHEgSF.ARQRSPY....APKGSVPSP...SPRP.QSLDAT.QVPSPL...PLAQPSTP.......PVRRLEllPSTD.SPMrwLEQSEG 348- 403 (35.92/ 6.52) ...............................HQrlvGPG...C...KAG............L.LPAESLL....SRAGF..SP...DSSK.ADSDAASSGGSDNkkkKRYRPRDYT.............................. 404- 501 (84.60/23.94) ...........VNLDgQMAEAGVKP..................vrlKER....K.LTFD.PM.TRQIKPLtqkePVR..ADSPvhtEQPPrTELDKQEAKASLQ...SPFEQT.NWKELSRNEI..IQ..SYLSrQSS..LLSSSG 505- 595 (99.93/29.42) PGAHHFMSeYLKQEE.STRRGARQPH..vlvPH...GPPtdlP...GLS....ReVTQD.DLdRIQAHQW....P..GVNGCQ...DT......QGNWYDWTQC...ISLDPHGDDGRLNVLP....................... --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IRDRLL 2) KKKKRYRPRDYTVNLD 3) RRLELL | 11 392 327 | 16 407 332 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab