<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29591

Description Uncharacterized protein
SequenceMVGRGTPTVTTIPDEKEPSKPVYKNQLTDCFDDILRLSAEMMVKQQMKSIQLDASIVNGFNKNQQNILNEKINLFHTILDDLALTIDNSKSYINEIYQIGKEKKIQKEKEEELRRIQEQEELELKRKKEQEELELKKKREQEELEMKKRKQEQEQEEARLKKKQQEEEEARLKKQRELELAREREEQEKLEIEKANEKTRQASNMLGNMPLGDSTSDLLSSFNPAALGINLENSNLNSNMNNNMPNNTNPVHGNNNSNNDTNNNSNNSNNNNNNSSSSNNNDNNNNNNNNNNNNSSSSNNGISTHDMDSVDMSMFAGLGNNEYDMTSFGLNLDDSGLGNMKSTPNNGNSMNRNSNESNDGMNVNSGNNNNNNNSTNNNNNNNNNNIIINDNDNNNNTNQSNQNNNKQMNSIPNDLSNGLVDADLGVPLGDLTGGMGQGVNEDYLTLNDFNDLNIDWSAPGEGDDLDLNGFNI
Length472
PositionTail
OrganismTetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / UCD 77-7) (Yeast) (Kluyveromyces blattae)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetaceae> Tetrapisispora.
Aromaticity0.03
Grand average of hydropathy-1.313
Instability index41.14
Isoelectric point4.55
Molecular weight53074.61
Publications
PubMed=22123960

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29591
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.72|      20|      22|     259|     280|       1
---------------------------------------------------------------------------
  252-  276 (34.60/ 7.24)	HGNNnsnndTNNNSNNSNNNNNNSS
  277-  296 (41.12/ 7.82)	SSNN.....NDNNNNNNNNNNNNSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     120.95|      22|      22|     117|     138|       2
---------------------------------------------------------------------------
  102-  116 (17.16/ 6.71)	......EKKIQK...EKEE.ELRRI
  117-  138 (39.40/23.79)	QEQEELELKRKK...EQEELELKKK
  139-  163 (33.12/18.97)	REQEELEMKKRKqeqEQEEARLKKK
  164-  183 (31.28/17.55)	Q.QEE.EEARLK...KQRELELARE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     117.05|      22|      22|     363|     384|       3
---------------------------------------------------------------------------
  338-  359 (36.58/ 8.72)	GNMKSTPNNGNSMNRNSNESND
  363-  384 (42.84/11.75)	VNSGNNNNNNNSTNNNNNNNNN
  388-  409 (37.63/ 9.22)	INDNDNNNNTNQSNQNNNKQMN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.06|      14|      34|     197|     210|       4
---------------------------------------------------------------------------
  197-  210 (26.67/11.08)	EKTRQASNMLGNMP
  232-  245 (27.39/11.59)	ENSNLNSNMNNNMP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.30|      15|      35|     413|     433|       5
---------------------------------------------------------------------------
  413-  433 (17.92/21.25)	NDLsnglvDADLGVP.....LgDLTG
  450-  469 (24.38/10.83)	NDL.....NIDWSAPgegddL.DLNG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29591 with Med2 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KKEQEELELKKKREQEELEMKKRKQEQEQEEARLKKKQQEEEEARLKKQRELELAREREEQEKLEIEKANEKTRQASNMLGNMPLGDSTSDLLSSFNPAALGINLENSNLNSNMNNNMPNNTNPVHGNNNSNNDTNNNSNNSNNNNNNSSSSNNNDNNNNNNNNNNNNSSSSNNGISTHDMDSVDMSMFAGLGNNEYDMTSFGLNLDDSGLGNMKSTPNNGNSMNRNSNESNDGMNVNSGNNNNNNNSTNNNNNNNNNNIIINDNDNNNNTNQSNQNNNKQMNSIPNDLSNGLVDADLGVPLGDLTGGMGQGVNEDYLTLNDFNDLNIDWSAPGEGDDLDLNGFN
127
471










Molecular Recognition Features






MoRF SequenceStartStop




1) LDLNGFNI
2) NIDWSA
465
453
472
458