<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29544
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSDPAGEIVHITQGYIPLAKVLTRLAQSTHNALQDQIAALAKMPVPTTAMNGNSTIPNSDVEDASSENIAKKTSILNFAMKEHRKWVKALVITEWSRKADMVSQLIDLRFHLQGQEVLFTGALDVMGHVKRDLTFARMPSPDLKTALQVLSTGEAAWMPDLSYIEPPPLTREEEIQWMSDVNTQLSLRLNLEDFDKIPYPFRNYEIDSGRVTFKVSGEFEVDLTIADEDFEKQFWFIDFRFAFRPAASSIPEGLKNYLESHVNDILSKDGLLGCYQFLHELVLTHKLNELKRQANQMSRGSWTGTLKVEPLNRALAIQYWTSRTQPGTPKSWVLVAVTSGKKANGQPDPKLSSHLTAKWYRDNKEVKEVKIAFDTDNLSAETLMKTVIGRHIDFLLGSVHSKLLSFPRFQHRQAAMILRTSQDDPAASSLAMRVGFKDSATLLIEPTTGVFAVKPHSKFTWSPENQLNNGKNPAEDGAACLENVRCAVMEDELSRRGSTTGWSIKRSPLNKDELRSLTNTREWTKTIWLHRAGWETNWFVMVLLSPSGDVWWLVDVNRNASGQALRLASKLPLNKGYPRLDDEFWNNLTLFASGMIAQAVDQRELHKQNIKFKPHGANNWSLPQQVRLPTLEIALSGIFPSMVFDNAEKDNPKTAGATEPGKLGPIVRSASASGISTKQPWANDIVSVRFKGVQPAEARPTGPESAKTGDDKSEVPFTCVSDAIIKVRRPAKFAMLKSHMVGRDVSWNARTGEFCLRMRSSIGQSMLESLKARVKAVDRFVSFFESMDKAKEWIVAESVSLKEVTFSYGPQAPEAGNKAQPSRLWRITLNLSQNDIDLVMGETNPHLPVTNLMQKLVNGTNGIGALMNWLPESLPALEAVKKIRETWRDVEARHQGRFRFMMDSVDEMSIQYSLAGTVPGNHLVHREITFLAHIKHRRGEPWWHIMRKPLNGASTPDDEFSKALKPVWEATGEKWTGLVTGAAGRPHDGTASLLLAIDEAIRPLAGSSFQNNSEVVVLE |
Length | 1019 |
Position | Tail |
Organism | Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (Wheat head blight fungus) (Fusarium graminearum) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.361 |
Instability index | 35.71 |
Isoelectric point | 8.57 |
Molecular weight | 114052.83 |
Publications | PubMed=17823352
PubMed=20237561
PubMed=26198851
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP29544
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 157.25| 36| 140| 142| 184| 1
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142- 179 (54.62/35.14) DLKTALQVLSTGEAAWMPDLSyIEpPPLTREEEIQ.WMS
289- 322 (51.38/23.49) ELKRQANQMSRG..SWTGTLK.VE..PLNRALAIQyWTS
330- 361 (51.25/24.32) KSWVLVAVTSGKKANGQPD......PKLSSHLTAK.WYR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 173.90| 53| 140| 730| 784| 2
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730- 784 (88.63/64.44) PAKFAMLKSHMVGRDVswNAR.TGEFCLRMRSSIGQSMLESLKARVKA...VDRFVSFF
875- 931 (85.27/54.58) PALEAVKKIRETWRDV..EARhQGRFRFMMDSVDEMSIQYSLAGTVPGnhlVHREITFL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 122.58| 38| 129| 240| 279| 4
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240- 279 (62.84/50.06) RFAFRPAASSIPEGLKNYLESHVNDIL....SKdgLLGCYQFLH
370- 411 (59.73/40.33) KIAFDTDNLSAETLMKTVIGRHIDFLLgsvhSK..LLSFPRFQH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.54| 17| 373| 180| 200| 9
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180- 200 (27.75/25.67) DVNTQLS...LRLNledfDKIP....YP
555- 578 (21.79/10.55) DVNRNASgqaLRLA....SKLPlnkgYP
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