<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29494

Description Uncharacterized protein
SequenceMPPTHQIIKVMRLSLHALAPHLLLAFAEIIVARTEDFSSIGKHGRYFDLVDFSVIEGFKVPADMTICSFKGKRNANDRAWACHCNVSYSSTDRFNLSQDRLTEEFGTPVQCQRLWGWTRRQNNTYRVDRPLTTEEEKIPVVHTLAIPKWLNRDDYLVFLKLYDPEKARLRSVYFFVATSFFGSYLFVHYDLICYSVQGDRYVGTMYVKDSWTVSHVLQTLRNLAGFRGSGRIELYKEIKFDPWVLCEAIDLHRTFSENEIVTEDIICYQKILKTQDLPKYHSVASFLQHICDQKEEEMKRQILEEKIAGLEHQASADRLEKVETLIAYDQMKHERDNAVRQVNELRDQSTHAILKFSRCDLEQATDHFTDACKVGDTEYGRTYKAIMHGTEVAIKLSSTESLFQQEVTVLGQCRHPNIITFIGVCSKISALVYEWLPNGRNLEDHIVCANNSTPLPWQNRTQIIGEICCALLFLHSNNKNPPTAALIHGDLRPCNILISNDASYRSRLCNVGLSSLFLQPGTCPPNLMERLPYMDPEFITTGELTTLSDVYSFGVIILRLLTGMAPLNLSKKVAAELESDNLHRLIDKSAGDWPYKEAKQLAVLGVRCAEMAREKRPDLLNDVWRVVRLLMRKPSSCPYFPPASPEVCVPAPFICPILMEIMKDPQVASDGFTYEGEALRRWFDSGNNRSPMTNLVLPDLKLIPNRVLRSSIHEYLRQQKQQQQQEEGSVT
Length731
PositionTail
OrganismOryza glaberrima (African rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.09
Grand average of hydropathy-0.280
Instability index47.95
Isoelectric point6.53
Molecular weight83740.12
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29494
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.76|      18|      20|     429|     448|       1
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  429-  448 (25.20/21.96)	SALVyEWlPNGRNLEDHIVC
  452-  469 (35.57/20.07)	STPL.PW.QNRTQIIGEICC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.73|      23|      29|      93|     121|       2
---------------------------------------------------------------------------
   99-  121 (45.89/43.76)	DR..LTEEFGTP.VQCQRLWGWTRRQ
  128-  153 (32.84/15.92)	DRplTTEEEKIPvVHTLAIPKWLNRD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.62|      19|      26|     250|     270|       3
---------------------------------------------------------------------------
  250-  270 (30.10/25.68)	DLHRTFSENEIVTEdiICYQK
  276-  294 (35.53/23.15)	DLPKYHSVASFLQH..ICDQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.98|      16|      24|     363|     378|       4
---------------------------------------------------------------------------
  363-  378 (30.03/20.52)	QATDHFTD.ACKVGDTE
  384-  400 (22.95/14.08)	KAIMHGTEvAIKLSSTE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29494 with Med32 domain of Kingdom Viridiplantae
Unable to open file!