<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p> Detailed information on MDP29453
Description
Uncharacterized protein Sequence MLGLWGMECVAEMTKVAQQKGSDPLLWAVQMYSNLNSAGESLPSLQLAEFLVSYICWDNNVPILWKFLEKALTLQIVPPMLLLALLSVRVIPCRHVQPAAYRLYLELVKRHAFELKSQINRPDYQKVMKSIDAVLHLSNIFGMPQSEPGILVVEFIFSIVWQLLDASLDDEGLLEFTPDKKSRWATLYHDMELDRHDNYSEQRTEHHEKLQNANTLMAVEMIGQFLQDKISSRLLYLARQNLPAHWLSFTQRLQLLGANSLALRKSRTLSPEALLQLTSDSCMVLSRECKTNSQKKFQTVMSSEYLSSSASLCHGASHSALWIPLDLVLEDSMDGYQVSATSAIETISGLIKTLRAINGTSWHDTFLGLWLATLRLVQRERDPIDGPMPHLETRLCMLLCIIPLVVGDLIEEEEERTPVDEKDNGPTGFWKEKKVAGKCRDDLVSSLQVLGDYQSLLTPPQPVLAAANQAAAKAMLFVSGITIGSAYFDCLNMTEMPVDCSGNMRHLIVEACIARNLLDTSAYLWPGYVNGRINQIPQCMPAQVPGWSSFMKGTPLTSVMVNALVSSPATSLAELEKIFEIAIEGSEDEKISAAAILCGASLICGWNIQEHTVHFILRLLSPPVPAENTEGNNYLINYAPILNVLFVGIASVDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNISWTLTSGEEISAHAVFSNAFILLLKLWRFNRPPLEYGIGDVPTVGSQLTPEYLLLVRNSHLMSAGNIHKDRNRRRLSEIASLSSPNSVFVDSFPKLKVWYRQHQACIASTLSGLVHGTPFHQIVEGLLNMMFRKINRGSQTTITSGSSSSSGPANEDASIGPKLPAWDILEAIPFVVDAALTACAHGRLSPRELATGLKDLADFLPASLATIISYFSAEVTRGVWKPVFMNGTDWPSPAANLLNVEGQIRKILAATGVDVPSLASGDSCPATLPLPLAAFTSLTITYKVDKASERFLNLAGQTLESLAAGCPWPCMPIVASLWTLKAKRWSDFLIFSASRTVFLHNSDAAVQLLKSCFTATLGMNSSPISSSGGVGALLGHGFKYHLCGGLCPVAPGILYLRAYGSIRDVVFLTEEIVSILMHSVREIVCSGLPRDRLEKLKANKDGIKYGQVSLAASMTRVKLAAALGASLVWISGGLMLVQLLIKETLPSWFISVQRLDQEEKSGGMVAMLGGYALAYFAVLCGAFAWGVDSSSSASKRRPKVLGTHMEFLASALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEEELALALLGVGGVGTMDAAAELIIDTEI Length 1322 Position Tail Organism Glycine max (Soybean) (Glycine hispida) Kingdom Viridiplantae Lineage Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine>
Glycine subgen. Soja.
Aromaticity 0.08 Grand average of hydropathy 0.188 Instability index 44.21 Isoelectric point 5.98 Molecular weight 144499.88 Publications PubMed=20075913
Function
Annotated function
GO - Cellular Component integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
GO - Biological Function GO - Biological Process regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
Interaction
Repeat regions
Repeats
>MDP29453
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 337.59| 89| 362| 513| 605| 1
---------------------------------------------------------------------------
513- 605 (141.21/100.76) IARNLLDTSAYL......................WPGYVNGRINQIPQCMPA.......QVPGWSS..............FMKGTPLTSVMVNALvSSPATSLaeLEKIFeIAIEGSEDEKISAAAILCGASLICG
874- 951 (81.13/46.73) ...........L......................SPRELATGLKDLADFLPA.......SLATIISyfsaevtrgvwkpvFMNGTDWPSPAANLL.................NVEG.QIRKILAATGVDVPSLASG
955- 1065 (115.25/69.80) PATLPLPLAAFTsltitykvdkaserflnlagqtLESLAAG..CPWP.CMPIvaslwtlKAKRWSD..............FLIFSASRTVFLHN..SDAAVQL..LKSCF.TATLGMNSSPISSSG...GVGALLG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.92| 18| 362| 2| 25| 2
---------------------------------------------------------------------------
2- 25 (23.56/23.00) LGLWgmecVAEMTKVaqQKGSDPL
367- 384 (33.37/14.82) LGLW....LATLRLV..QRERDPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 212.12| 76| 931| 136| 322| 3
---------------------------------------------------------------------------
216- 322 (102.21/215.76) LMAVEMigqflqdkissrllyLARQNLPAhWLSFTQRL..........QLLGANSLAlrksrtlsPEALLqltsdsCMVLS..RECKTNSQKKFQTVMSS..EYLSSS..ASLCHGAShSALW
1164- 1255 (109.91/40.33) LMLVQL...............LIKETLPS.WFISVQRLdqeeksggmvAMLGGYALA........YFAVL......CGAFAwgVDSSSSASKRRPKVLGThmEFLASAldGKISLGCD.SATW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.33| 39| 612| 85| 124| 5
---------------------------------------------------------------------------
85- 124 (65.26/45.71) LLSVRVIPCRHVQPAAYRLYLEL..VKRHAFE........LKSQINrPDY
689- 737 (55.07/33.53) LTSGEEISAHAVFSNAFILLLKLwrFNRPPLEygigdvptVGSQLT.PEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 147.30| 46| 162| 456| 501| 7
---------------------------------------------------------------------------
456- 501 (81.08/42.70) LLTPPQPVL.AAANQAAAKAMLFVSGITIGSAYFDCLNMTEM....P.VDCS
619- 670 (66.22/33.73) LLSPPVPAEnTEGNNYLINYAPILNVLFVGIASVDCVQIFSLhglvPqLACS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.36| 16| 454| 386| 406| 8
---------------------------------------------------------------------------
386- 406 (25.94/24.52) GP.MPHLEtrlcmLLCIIPLVV
846- 862 (27.42/13.20) GPkLPAWD.....ILEAIPFVV
---------------------------------------------------------------------------
Explaination for Stockholm format
The "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column. It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column. This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column. #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.
Alignment of MDP29453 with Med33 domain of Kingdom Viridiplantae
Intrinsically Disordered Regions
IDR Sequence Start Stop
NA NA NA