<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29453

Description Uncharacterized protein
SequenceMLGLWGMECVAEMTKVAQQKGSDPLLWAVQMYSNLNSAGESLPSLQLAEFLVSYICWDNNVPILWKFLEKALTLQIVPPMLLLALLSVRVIPCRHVQPAAYRLYLELVKRHAFELKSQINRPDYQKVMKSIDAVLHLSNIFGMPQSEPGILVVEFIFSIVWQLLDASLDDEGLLEFTPDKKSRWATLYHDMELDRHDNYSEQRTEHHEKLQNANTLMAVEMIGQFLQDKISSRLLYLARQNLPAHWLSFTQRLQLLGANSLALRKSRTLSPEALLQLTSDSCMVLSRECKTNSQKKFQTVMSSEYLSSSASLCHGASHSALWIPLDLVLEDSMDGYQVSATSAIETISGLIKTLRAINGTSWHDTFLGLWLATLRLVQRERDPIDGPMPHLETRLCMLLCIIPLVVGDLIEEEEERTPVDEKDNGPTGFWKEKKVAGKCRDDLVSSLQVLGDYQSLLTPPQPVLAAANQAAAKAMLFVSGITIGSAYFDCLNMTEMPVDCSGNMRHLIVEACIARNLLDTSAYLWPGYVNGRINQIPQCMPAQVPGWSSFMKGTPLTSVMVNALVSSPATSLAELEKIFEIAIEGSEDEKISAAAILCGASLICGWNIQEHTVHFILRLLSPPVPAENTEGNNYLINYAPILNVLFVGIASVDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNISWTLTSGEEISAHAVFSNAFILLLKLWRFNRPPLEYGIGDVPTVGSQLTPEYLLLVRNSHLMSAGNIHKDRNRRRLSEIASLSSPNSVFVDSFPKLKVWYRQHQACIASTLSGLVHGTPFHQIVEGLLNMMFRKINRGSQTTITSGSSSSSGPANEDASIGPKLPAWDILEAIPFVVDAALTACAHGRLSPRELATGLKDLADFLPASLATIISYFSAEVTRGVWKPVFMNGTDWPSPAANLLNVEGQIRKILAATGVDVPSLASGDSCPATLPLPLAAFTSLTITYKVDKASERFLNLAGQTLESLAAGCPWPCMPIVASLWTLKAKRWSDFLIFSASRTVFLHNSDAAVQLLKSCFTATLGMNSSPISSSGGVGALLGHGFKYHLCGGLCPVAPGILYLRAYGSIRDVVFLTEEIVSILMHSVREIVCSGLPRDRLEKLKANKDGIKYGQVSLAASMTRVKLAAALGASLVWISGGLMLVQLLIKETLPSWFISVQRLDQEEKSGGMVAMLGGYALAYFAVLCGAFAWGVDSSSSASKRRPKVLGTHMEFLASALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEEELALALLGVGGVGTMDAAAELIIDTEI
Length1322
PositionTail
OrganismGlycine max (Soybean) (Glycine hispida)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.08
Grand average of hydropathy0.188
Instability index44.21
Isoelectric point5.98
Molecular weight144499.88
Publications
PubMed=20075913

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29453
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     337.59|      89|     362|     513|     605|       1
---------------------------------------------------------------------------
  513-  605 (141.21/100.76)	IARNLLDTSAYL......................WPGYVNGRINQIPQCMPA.......QVPGWSS..............FMKGTPLTSVMVNALvSSPATSLaeLEKIFeIAIEGSEDEKISAAAILCGASLICG
  874-  951 (81.13/46.73)	...........L......................SPRELATGLKDLADFLPA.......SLATIISyfsaevtrgvwkpvFMNGTDWPSPAANLL.................NVEG.QIRKILAATGVDVPSLASG
  955- 1065 (115.25/69.80)	PATLPLPLAAFTsltitykvdkaserflnlagqtLESLAAG..CPWP.CMPIvaslwtlKAKRWSD..............FLIFSASRTVFLHN..SDAAVQL..LKSCF.TATLGMNSSPISSSG...GVGALLG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.92|      18|     362|       2|      25|       2
---------------------------------------------------------------------------
    2-   25 (23.56/23.00)	LGLWgmecVAEMTKVaqQKGSDPL
  367-  384 (33.37/14.82)	LGLW....LATLRLV..QRERDPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     212.12|      76|     931|     136|     322|       3
---------------------------------------------------------------------------
  216-  322 (102.21/215.76)	LMAVEMigqflqdkissrllyLARQNLPAhWLSFTQRL..........QLLGANSLAlrksrtlsPEALLqltsdsCMVLS..RECKTNSQKKFQTVMSS..EYLSSS..ASLCHGAShSALW
 1164- 1255 (109.91/40.33)	LMLVQL...............LIKETLPS.WFISVQRLdqeeksggmvAMLGGYALA........YFAVL......CGAFAwgVDSSSSASKRRPKVLGThmEFLASAldGKISLGCD.SATW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     120.33|      39|     612|      85|     124|       5
---------------------------------------------------------------------------
   85-  124 (65.26/45.71)	LLSVRVIPCRHVQPAAYRLYLEL..VKRHAFE........LKSQINrPDY
  689-  737 (55.07/33.53)	LTSGEEISAHAVFSNAFILLLKLwrFNRPPLEygigdvptVGSQLT.PEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.30|      46|     162|     456|     501|       7
---------------------------------------------------------------------------
  456-  501 (81.08/42.70)	LLTPPQPVL.AAANQAAAKAMLFVSGITIGSAYFDCLNMTEM....P.VDCS
  619-  670 (66.22/33.73)	LLSPPVPAEnTEGNNYLINYAPILNVLFVGIASVDCVQIFSLhglvPqLACS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.36|      16|     454|     386|     406|       8
---------------------------------------------------------------------------
  386-  406 (25.94/24.52)	GP.MPHLEtrlcmLLCIIPLVV
  846-  862 (27.42/13.20)	GPkLPAWD.....ILEAIPFVV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29453 with Med33 domain of Kingdom Viridiplantae
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