<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29354

Description Uncharacterized protein
SequenceMEAGDERAAEAQREKEAGNAAYHKLFLETAVLHYTRGADLDPRDISFLTNRAAAYLLMSKYKECVRDCDEAVEKGRELRADNRLVARALSRKASALLKLAGCAGDYAPAIRALQQSLAEHYSEETRAKLREAETARKEVEEQERLDQEASDYHREKGNEFFKQKKYQEAASHYTEAIKMNPNDPRVFSNRAQCHIYLGNLPEGLEDAENCIEVDPTFLKGYVRKANVQFLMDNYESALATYVEGLKYDPNNIDVIDGLRRCAACIKSSNGGHVEPVDLKEILGDFRSDDDLRSKLQRNMEEAAVFKKEASDERLRRIESERMARTSEDLYLNQVQQRKETEEYLSKVQEELQQLKVRQDEFIDELQKANEHNEDLQHQLSELSESRERYDQLLSEHDHLLHERNHAVREVDELRQRRGQILSVLLTAMHCEFSSSELERATENFNSSLKIGEGGFGCVYRGVLRNMAVAIKVLRPDGLQGRSQFEQEVAILSRVRHPNLVTLLGACSESSTLVYEFLPNGSLEDFLVCAEKRQTLTWQIRIQIIAEICSALIFLHENKPHPVVHGDLKPANILLDVNLVSKLSDFGISRLLIQSSSDNTTLYRTMHPVGTPMYMDPEFLATGEMTPRSDVYSFGIVVLRLLTGRPPVGIKKIVEDAMEEGDLNTIIDTSAGEWPDVHVQQLAYLALRCTELSRKCRPDLSGDLWRAVEAMRDATTLCSPSSSRSVLDENRTPSYFICPISQDVMNDPHVAADGFTYEGDCIRSWLSTGRETSPMTNLPLQHDELIPNLALRSAIQEWLQLQNTAL
Length805
PositionTail
OrganismBrachypodium distachyon (Purple false brome) (Trachynia distachya)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Brachypodieae> Brachypodium.
Aromaticity0.06
Grand average of hydropathy-0.520
Instability index49.05
Isoelectric point5.21
Molecular weight91388.90
Publications
PubMed=20148030

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29354
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     104.44|      25|      29|     335|     359|       1
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  306-  328 (27.77/15.49)	.KKEASDERLRRIESE.RMARTSED
  335-  359 (37.56/23.71)	QQRKETEEYLSKVQEELQQLKVRQD
  366-  390 (39.11/25.02)	QKANEHNEDLQHQLSELSESRERYD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     196.66|      53|     138|       5|      73|       2
---------------------------------------------------------------------------
    5-   48 (55.42/28.09)	............................DERAAEAQREKeaGNAAYHKLF.....................LETAVLHYTRGADLDPRDISFL
  146-  187 (66.78/30.14)	............................DQEASDYHREK..GNEFFKQKK.....................YQEAASHYTEAIKMNPNDPRVF
  202-  255 (43.72/35.15)	EGLEDAENCIE.......................................vdptflkgyvrkanvqflmdnYESALATYVEGLKYDPNNIDVI
  256-  303 (30.74/ 6.18)	DGLRRCAACIKssngghvepvdlkeilgDFRSDDDLRSK.......LQRN.....................MEEAA.................
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29354 with Med32 domain of Kingdom Viridiplantae
Unable to open file!