<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29223
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MGDFPPPERTSVKASELVHRAVDRSYEDFRTLMHQLPTMREEERREPLLAHLQSSRKRFAQLLAVLKWSVQSPLLQQCDTLLQQTESYRNNVNETNDRLFFMHADLNRAKERRYDLSTAVDVLYGGSYLRLPTIINNAMFPRELPEVDTEQAATEVADIIRFRLIEAEIPEQLSNIKLEGGFVTCQAEGEFEIVLTIQGKEKDAKWRVISVNTVLTDPQAFEDHAQAASTSVLRIIRTNAPNAAHYNHLKNLVQRAMNKSEKPFVDAFNVMREFCSSLALQILASQGKLLMEGRWKNRIMIKHHRDQYVLDICYWPKACTRKEAQPLTEQQRLLQQLSDPVANSQKGSSLPYPESSLCVRLGFDPNQKKLLSVSLSPSLPPNLPGYTSLLSALEVPSNMFLLSAENLLIAAMRAHVSAALFSVGRLLVVDSPDDKASTQLVSGEDVSMICSDTSLRIARADIGGLQQFLEVTFDIREGQFIVSSVAAAKHPALYATVKQLERILNAQCKVELGGNIDKSFPNDFALVSGNGKGEKSNELIHASVRKALCEIVADEVAQIGSSFKGIEVLRSVNLNWERYLAFRQQHGGQTEDLSISETALYFQLTSSKESTCYLVIEIDKYGEVDGMNGNVHEAAEVEEYVRLPCFSLLQTSAGLPGQPSGVQFIQRFGAFKKEDLHPSVTRHNEIIANDLRGSRKRPYGSNGNSLVGNNVRSTKKALLDGGRVQENTGYWLDDAEHNAVSRNFVPHIASVLLHAITLCSERIQLQHFVNFARRRKSRIRYSGEAGTSNREGTGGQVVTLSFPEKVNTDPLKIVAIQGHLKHGGGFELCLQLSSLPFKFILPKDPKQHLLSERSHYVNARGQLIFKYPTTLVTSDLFSENPLEMFMVELICVVRPLCELAVKLEKMLTSVGRYTNDIKSDGHFYVESADPFAIVLACRAPNPRHCIAAGSSPDGMTTYRVTVQFKQKMGFVVNYSHKAEHPLMHFIQSALNGHSDPAQFVEALERTCIPMGILASVVESQLLCAKYYRQDPPPNAKDSAANGGPKAVGRGKMGGKGMKLGYKFKLPGEEKGYYAEKSYGGDDKSFVPAELVMIPRSQTQVRLSYGDRSAVDIYFLENHSVKMQSSTGGVRVPSCPSEKGIVMDCQNFADKLRSALSEMASA |
Length | 1161 |
Position | Tail |
Organism | Phytophthora ramorum (Sudden oak death agent) |
Kingdom | Oomycetes |
Lineage | Eukaryota> Sar> Stramenopiles> Oomycota> Peronosporales> Peronosporaceae>
Phytophthora.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.289 |
Instability index | 40.50 |
Isoelectric point | 7.93 |
Molecular weight | 129213.99 |
Publications | PubMed=16946064
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP29223
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 236.69| 75| 221| 765| 855| 1
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174- 255 (111.71/58.44) SNIKLEGGFVTCQAEGEFEIVLTIQGKEK..DAKWRVISVNTVLTDPQAFEDHAQAASTSvLRIIRTNAPNaahyNHLknLVQR
777- 853 (124.97/75.35) SRIRYSGEAGTSNREGTGGQVVTLSFPEKvnTDPLKIVAIQGHLKHGGGFELCLQLSSLP.FKFILPKDPK....QHL..LSER
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 162.71| 61| 482| 84| 172| 5
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84- 172 (71.92/122.51) QTESYrnNVNETNdrLFFmhaDLNRAKErrydlstavdvlyGGSYLrlptIINNAMFPrelpEVD....TEQAATEVADIIR...FRLIE..AEIPEQ
589- 658 (90.80/65.71) QTEDL..SISETA..LYF...QLTSSKE.............STCYL....VIEIDKYG....EVDgmngNVHEAAEVEEYVRlpcFSLLQtsAGLPGQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 282.05| 93| 482| 394| 491| 6
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394- 491 (143.44/114.99) EVPSNMFLLSAENLL..IAAMRAHVSAALFSVGRLlvvdSPDDKASTQL.VSGED...VSMICSDTSLR...IARADIGGLQQF.LEVTFDIREGqFIVSSVAAAKHP
879- 981 (138.62/97.35) ENPLEMFMVELICVVrpLCELAVKLEKMLTSVGRY....TNDIKSDGHFyVESADpfaIVLACRAPNPRhciAAGSSPDGMTTYrVTVQFKQKMG.FVVNYSHKAEHP
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