<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29193

Description Uncharacterized protein
SequenceMNFCEAEVTETRHLTQIEAYYSRRKEGGVEFHLCSDELHAVSLKAKEKLLISSQTIEAIDSDFGCERPFKVVSVTSWQQNTPDRRALKGTAKTRLANGDVYPHEAAQDEDSLNSEKVRKGFLTGPIAHEHASLNGGIDRDDANKRAALLYLQINQKKGDTNLLSGKKTKDSVSQLPVASPPKEKDIRTQWYQNLAKGKAYGSLIQNPPSLKNTERMFNDLYYYRIESQRAIWVMKLAANIAGNNNSRGKNKSFNGEKFAVEYAHILSREVRQVFVSLFQLPSLDECEETSERWYYFTQLSRDAFDDGVIDRQEYVNELCNIFTDVFLQRKEFEDTKYQIQLWMQYFHHFAPSATQNIVLARRVATMACQKIDMLKDEFEEDEAELLDEIRNGTYDYSYVPSRDDEAPSTSKSPSQTHEPMDLSREIKKEEPDQESPMTSGTTPGKADGGSVNDVVMREETAERKNVVEIVTGKVKEEPLDDDEEPPKLPVSEEAKKDDGKKDGEKKKGIPYDPERPDKFILDVMFATSDYRDVLNALVSLIFMCIGEQPGAIVWNKFYVGFNRAPYMLTQLGGSPLDYLDNYSLADLPFDFGNADANENVRELMRNHESDLSLRSELVQHQWVLTSQTQRAHAKLIDGCIDVVGHLDYVDVLAPGTVKRTFERIFMSINEARYAHEVVSRIRLCLTWAITVQRDGQWRGWLVAKVLKLLLDTRPHDEKHGYFGGNHLNLILIDFINHDLPKSGEENYYKEFSNFCSLFFELARFDVITHANFYEMWKNFHRINCRHNGLDEEQPLMIDFPPVRDDEVGKKKEADTSAGSDENRPHEVDNTKMEVDGEGNAVKIEVIGLKELELEPKKSLIPFITIPDETKDGFRLLDEDIPPLTQLIIQLPIPADKTMMDKRTLILYRNARTKKDYVAAAKKNHRDTVGYSINKKYSRAVFHACSYVFTFGFEPASTIAF
Length960
PositionKinase
OrganismPristionchus pacificus (Parasitic nematode)
KingdomMetazoa
Lineage
Aromaticity0.09
Grand average of hydropathy-0.602
Instability index36.84
Isoelectric point5.38
Molecular weight109862.46
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29193
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     173.12|      46|      47|     273|     319|       1
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  200-  238 (47.14/25.60)	.YGSLI.QnPPSLKNTERMFNDLY.YYRIESQRAI.........WVMKLaA
  273-  319 (77.17/50.46)	VFVSLF.Q.LPSLDECEETSERWY.YFTQLSRDAFDDGVIDRQeYVNEL.C
  321-  362 (48.80/26.47)	IFTDVFlQ.RKEFEDTKYQIQLWMqYFHHFAPSATQNIVLARR........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     169.83|      56|      70|     420|     478|       2
---------------------------------------------------------------------------
  420-  478 (83.90/58.25)	MDLSREIKKEEPDQESPMTSGT..TPGKADgGSVNDVVMreETAERKNV....VEIVTGKVKEEP
  488-  549 (85.93/49.72)	LPVSEEAKKDDGKKDGEKKKGIpyDPERPD.KFILDVMF..ATSDYRDVlnalVSLIFMCIGEQP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.72|      18|     394|     386|     405|       4
---------------------------------------------------------------------------
  386-  405 (29.68/20.95)	LDEIRNGTYDYSyvPSRDDE
  789-  806 (35.04/18.44)	LDEEQPLMIDFP..PVRDDE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     176.43|      57|     750|     115|     172|       5
---------------------------------------------------------------------------
  115-  172 (89.72/73.20)	EKVRKGF.L....TGPIAHEHASLNGGIDRDDANKRAALLYLQINQKKgDTNLLSGKKTKDSV
  867-  928 (86.71/65.06)	DETKDGFrLldedIPPLTQLIIQLPIPADKTMMDKRTLILYRNARTKK.DYVAAAKKNHRDTV
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     164.08|      49|     166|     558|     606|       6
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  558-  606 (87.83/59.76)	YVGFNRAPYMLTQLGGSPL......DYLDNYS.LADLPFDFGNAD..ANENVRELMRN
  721-  778 (76.25/50.83)	YFGGNHLNLILIDFINHDLpksgeeNYYKEFSnFCSLFFELARFDviTHANFYEMWKN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29193 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) NTPDRRALKGTAKTRLANGDVYPHEAAQDEDSLNS
2) NVVEIVTGKVKEEPLDDDEEPPKLPVSEEAKKDDGKKDGEKKKGIPYD
3) YSYVPSRDDEAPSTSKSPSQTHEPMDLSREIKKEEPDQESPMTSGTTPGKADGGSVNDVVMREETAE
80
465
396
114
512
462










Molecular Recognition Features






MoRF SequenceStartStop




NANANA