<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29191

Description Uncharacterized protein
SequenceMIDYAFKKELEQNREHVNEIFHYEGSKIGRGTYGHVYRAVPKCTSTPQYTAKEYALKLIDSPYNQGFSISACREIALLRELSHANLINLQRVFLSTERKANGEAAVKVFLLLEYAEHDLWHIIKFHRSAKAKKTPVHVDKGMVKSVIYQILNGIDYLHSNWVLHRDLKPANILVMGNGTERGRVKIADMGFARIFNNPLKPLSDLDPVVVTYWYRAPELLLGAKHYTKAIDVWAIGCIFAELLTSDPIFYCKEEENIKTPTPYHKTQLGQIFSVMGYPAEAEWPNIKDTPEYGRLRQDFKETNFIGCSLARHMERNKQQTNNSQFRLLLKLLTMDPSKRLSADEAMKDEFFKEDPKPSNDIFGCLEQIPYPKRESMNDSEEVDKKTLMLRQHAMASQLALQQHAAQSRAVEAQLALERQQAAQLQQQQQEAAARMQQAQQQQAPPPQQPAVKKMRMAQGMQPQAAFGGGPSVDMAGPSTAAAAPMQFGAGPAVAVQQPDPVAMMQQRHPHQQHQQMMHMQQQQQMGYQQHQQAQHHQQQQHQMQQQQLMAQQQHQNNLMLQQQQQQRQAQMQQQQMQPPPAYGMQQQMMPG
Length591
PositionKinase
OrganismPristionchus pacificus (Parasitic nematode)
KingdomMetazoa
Lineage
Aromaticity0.07
Grand average of hydropathy-0.694
Instability index49.16
Isoelectric point8.84
Molecular weight67679.52
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29191
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      71.77|      15|      15|     511|     525|       1
---------------------------------------------------------------------------
  485-  524 (22.90/ 6.09)	M..QfgagpavavqqpdpvammqqrhphqQHQQMMHMQQQQ.Q
  525-  542 (24.27/ 6.91)	MgyQ.........................QHQQAQHHQQQQhQ
  549-  565 (24.59/ 7.11)	MaqQ.........................QHQNNLMLQQQQ.Q
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     181.96|      62|     126|     134|     207|       2
---------------------------------------------------------------------------
  134-  207 (87.59/95.55)	TPVHvdkgmvKSVIYQILNGIDY.LHSNW..........vLHRDLKPANIL..VMGNGTERGRVKIADMGFaRIFnnpLKPLSdLDP
  261-  336 (94.37/64.63)	TPYH......KTQLGQIFSVMGYpAEAEWpnikdtpeygrLRQDFKETNFIgcSLARHMERNKQQTNNSQF.RLL...LKLLT.MDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     110.57|      17|      47|     447|     463|       3
---------------------------------------------------------------------------
  428-  442 (26.90/ 8.70)	QQEAAARMQQAQ..QQQ
  447-  463 (33.78/12.77)	QQPAVKKMRMAQGMQPQ
  496-  510 (26.98/ 8.75)	QQP..DPVAMMQQRHPH
  577-  590 (22.90/ 6.33)	QPPPAYGMQ..QQMMP.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.66|      15|      15|     392|     406|       4
---------------------------------------------------------------------------
  392-  406 (27.62/15.45)	HAMASQLALQ.QHAAQ
  408-  423 (21.04/10.05)	RAVEAQLALErQQAAQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29191 with CDK8 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KRESMNDSEEVDKKTLMLRQHAMASQLALQQHAAQSRAVEAQLALERQQAAQLQQQQQEAAARMQQAQQQQAPPPQQPAVKKMRMAQGMQPQAAFGGGPSVDMAGPSTAAAAPMQFGAGPAVAVQQPDPVAMMQQRHPHQQHQQMMHMQQQQQMGYQQHQQAQHHQQQQHQMQQQQLMAQQQHQNNLMLQQQQQQRQAQMQQQQMQPPPAYGMQQQMMPG
372
591










Molecular Recognition Features






MoRF SequenceStartStop




NANANA