<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29164
Description |
Mediator of RNA polymerase II transcription subunit 4 |
Sequence | MATTTEKCTKERLLSALADLEVLSRELIEMLALSRTQKLPQPGEDTQVLELLVQRDAEFQELMEVAQQQGKVHEEMQLLEKEVEKRDSDIQQLQKQLKEAEHILATAVYQAKEKLRSIDKARKGNISSEEIIKYAHRISASNAVCAPLNWVPGDPRRPYPTDLEMRSGLLGHMANLPSNGMNGHLPGDALAAGRLPDVLTPHYPWQTSDMSVGILPPHHGNDFGLDPPGHNKENEDDVEAMSTDSSSSSSDSD |
Length | 253 |
Position | Middle |
Organism | Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata>
Eupercaria> Tetraodontiformes> Tetradontoidea> Tetraodontidae> Tetraodon.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.642 |
Instability index | 54.63 |
Isoelectric point | 4.97 |
Molecular weight | 28064.19 |
Publications | PubMed=15496914
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364141
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP29164
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.29| 24| 28| 44| 71| 1
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44- 71 (35.74/43.48) EDTQVLELLV.QRDAEFQELmevaQQQGK
74- 98 (36.55/31.07) EEMQLLEKEVeKRDSDIQQL....QKQLK
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