<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29029

Description Uncharacterized protein
SequenceMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFLEDPLPTTDVFAGCQIPYPKREFLNEDEPEEKTEKNQTQQHQQTTGQAQAQNQQQTVAQQATSQQTSAQTNGTTGATGGTVGGALQHGQDQAPANKKPRIGAPTATGMLPSEYQHSGPRLGYQSNIQGSSQPQSTLGYSSSSQQSSQYSHQTQRY
Length331
PositionKinase
OrganismTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata> Eupercaria> Tetraodontiformes> Tetradontoidea> Tetraodontidae> Takifugu.
Aromaticity0.08
Grand average of hydropathy-0.782
Instability index50.55
Isoelectric point6.51
Molecular weight37182.12
Publications
PubMed=21551351

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29029
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.86|      15|      17|     291|     307|       1
---------------------------------------------------------------------------
  291-  307 (23.07/21.53)	HSgpRLGYQSNIQGSSQ
  309-  323 (25.79/15.13)	QS..TLGYSSSSQQSSQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.61|      21|      43|     216|     238|       2
---------------------------------------------------------------------------
  216-  238 (32.75/21.53)	QHQQttGQAQAQNQQQTVAQQAT
  262-  282 (38.86/20.10)	QHGQ..DQAPANKKPRIGAPTAT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29029 with CDK8 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IPYPKREFLNEDEPEEKTEKNQTQQHQQTTGQAQAQNQQQTVAQQATSQQTSAQTNGTTGATGGTVGGALQHGQDQAPANKKPRIGAPTATGMLPSEYQHSGPRLGYQSNIQGSSQPQSTLGYSSSSQQSSQYSHQTQRY
192
331










Molecular Recognition Features






MoRF SequenceStartStop




1) PANKKPRIGAPT
2) PRLGYQSNIQ
3) QYSHQTQRY
4) SQPQSTLGYSS
269
294
323
306
280
303
331
316