<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28893
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MTTELDSSSKMLQSNGISNGLQDFNNQAKFDTPMTNSNQSNDPVSVPNSINKLPPSYTRLSLETNKPPTIPHVQINQTSLSLIIRNLTVFTIKEISQYMKTNLHNTMDNSKTTKKINFLNLIIFLRNQFLKLYVLIKWSRTIKNNNFHILIDLLNWFRTTNMSVNNCIWSLKSSLESMTNAKLPNVDLITALEVLSLGRPNLQTFKILKNDNLNYVNGMIEIPSNLIISKLNDLNLVNSIKISMMEVPPQFNNYNVKNGKIYITVPGEFEIQLSTVDHQSNLFFVDLTLLLNSSSETKESNDETTSDTGNNNSNDTSNMENNDDNKSSSPGNKIISKNFDNSLPLNKQRLEKVINEILFKSSKPLFSLYQFLHKYILTLKLYMIHMELLNLETLGKYSGGNLIHSYDSKKSIINGRYWINGKTGNKGKFTIGVAKSTETLVLRWDNYNEISTQDKTPSIYPDLLNNIENILDEIMFNHANLIRLDLLSKKVFQEDEDNLDVLLFQLPTTCQSTAPVQLKIDLITGVFYFKNPTPLLLEYTQQINRAETTTDLLKILQKLKLDKITQILNNMFEKTGWICSKAIKLSKSITTDIKVNNRTKNNEDDDRILQRDMFVSLPKWPIKWYLVLSIISSDSSCIIEKRIGKIVSNKGNWELKYLDPKSIHSSKMESITYQKIMPLQKSILHRIINHMLIDSLNQLNIHNKVCSTEVINSVLPKYIVEDLQKDSSDDSSEEYTSVIALELQSFLEGSKALNGILENSMFLRIDYKNSLIRLYAKFKKDKMIKQVQCEELLTHFIEDNSLDFYLNETFKNLGEIVKYLTTFRQKLMQLVVVTDVVDKLHKNFSSEFFKITELKPNEISFKYLKDQDTNDDKQDCTINIITSEQMVKNLTFKLSESNPQHVIQPFINNSSLDYHFIFNYLQFTSSFFITLSKIINETQQNTVKHSPTVRLGLHNLSEYQLIYYNPESGTKLTLIIELKNVSHNSRSKIHYFIHFSEDEHITTKSLAYPMIHQVSNQIFTLDANAQAKSRYPFAIRLIDGISCDSRDIENILSDIHEILKVDSDKKNNTN |
Length | 1070 |
Position | Tail |
Organism | Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) (Yeast) (Kluyveromyces africanus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Saccharomycetaceae> Kazachstania.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.359 |
Instability index | 38.84 |
Isoelectric point | 7.86 |
Molecular weight | 123244.64 |
Publications | PubMed=22123960
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | core mediator complex GO:0070847 IEA:EnsemblFungi
mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | RNA polymerase II repressing transcription factor binding GO:0001103 IEA:EnsemblFungi
TFIIB-class transcription factor binding GO:0001093 IEA:EnsemblFungi
transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | negative regulation of transcription by RNA polymerase II GO:0000122 IEA:EnsemblFungi
positive regulation of transcription by RNA polymerase II GO:0045944 IEA:EnsemblFungi
|
Interaction
Repeat regions
Repeats |
>MDP28893
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.64| 11| 39| 517| 527| 1
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517- 527 (18.80/10.95) QLKIDLITGVF
558- 568 (17.84/10.01) KLKLDKITQIL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.20| 34| 42| 753| 791| 2
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753- 787 (52.68/45.14) LNGILE.NSM..FLRIDYKN..SLIRLYAKFKKdKMIKQV
793- 831 (43.52/21.91) LTHFIEdNSLdfYLNETFKNlgEIVKYLTTFRQ.KLMQLV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.06| 27| 40| 74| 100| 3
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74- 100 (44.03/26.60) QINQTSLSLIIRN..LTVFTIKEISQYMK
115- 143 (40.03/23.50) KINFLNLIIFLRNqfLKLYVLIKWSRTIK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 189.21| 60| 285| 1| 66| 4
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1- 66 (90.06/62.45) MTTELDSSSKMLQSNGisNGLQDFNNQAKFDTP.MTNsNQSNDPvSVPNsiNKLPPSYTRLSLETNK
287- 347 (99.14/51.21) LTLLLNSSSETKESND..ETTSDTGNNNSNDTSnMEN.NDDNKS.SSPG..NKIISKNFDNSLPLNK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.17| 18| 40| 211| 228| 5
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211- 228 (32.39/21.65) DNLNYVNG..MIEIPSNLII
252- 271 (28.77/18.34) NNYNVKNGkiYITVPGEFEI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.14| 24| 32| 620| 643| 7
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620- 643 (43.88/25.85) WPIKWYLVLSIISSDSSCIIEKRI
653- 676 (43.25/25.38) WELKYLDPKSIHSSKMESITYQKI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.88| 20| 39| 393| 412| 8
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393- 412 (34.60/19.89) TLG.KYSGGNLIHSYDSKKSI
430- 450 (30.27/16.56) TIGvAKSTETLVLRWDNYNEI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.53| 14| 40| 920| 945| 11
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920- 935 (19.67/ 7.81) YLQFTSSFFITLskII
963- 976 (23.85/16.03) YYNPESGTKLTL..II
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.00| 24| 463| 576| 602| 15
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576- 602 (39.71/30.70) GWIC.SKAIklsKSITTDI....KVNNRTKNN
1040- 1068 (33.29/18.12) GISCdSRDI...ENILSDIheilKVDSDKKNN
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