<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28763

Description Uncharacterized protein
SequenceMNPTNPSTAASGPGSGKTASFLNARAYQTVKRGVMATFEDGRDQSAGYQPKARVTERYRIIGFISSGTYGRVYKAVSRTSNSEGIAVVRTSSGLTPTSNSGPAPIEVAIKKFKPDKEGEQVSYTGISQSAIREMSLCSELRHPNVIRLVEIILEDKCIFMVFEYAEHDLLQIIHHHTQQPRHPIPPATVKSIMFQLLNGCQYLHTNWVLHRDLKPANIMVTSGGEVKIGDLGLARRFDKPLHSLFSGDKVVVTIWYRAPELILGSYHYTPAIDMWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMHKIAEIVGLPTKDRWPLLPSMPEYSQLNTLSTMQHNTHSHHHHHHQNPPNRGYPPSSHLEKWYYNTINNNSGAGSAASGPNGQPALQSLGAEGYRLLAGLLEYDPEKRLTAAQSLQHEFFSTGDRVSSNCFEGIKVEYPHRRVSQDDNDIRTSSLPGTKRSGLPDDTLLRPAKRMKE
Length488
PositionKinase
OrganismHypocrea atroviridis (strain ATCC 20476 / IMI 206040) (Trichoderma atroviride)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Hypocreaceae> Trichoderma.
Aromaticity0.08
Grand average of hydropathy-0.503
Instability index41.09
Isoelectric point9.19
Molecular weight54417.11
Publications
PubMed=21501500

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP28763
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.97|      24|     178|     163|     186|       1
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  163-  186 (47.98/30.76)	EYAEHDLLQII.........HHHTQQPRHPIPP
  334-  366 (40.99/25.20)	EYSQLNTLSTMqhnthshhhHHHQNPPNRGYPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.95|      13|      15|      71|      84|       2
---------------------------------------------------------------------------
   71-   84 (18.40/14.25)	RVYKAVSRTSNSeG
   89-  101 (23.55/13.51)	RTSSGLTPTSNS.G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.45|      27|     375|       2|      28|       3
---------------------------------------------------------------------------
    2-   28 (48.39/28.43)	NPTNPSTAASGPGSGKTASFLNARAYQ
  380-  406 (48.06/28.18)	NNSGAGSAASGPNGQPALQSLGAEGYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      27.46|       9|      32|     410|     419|       4
---------------------------------------------------------------------------
  410-  419 (13.12/13.03)	GL.LEYdPEKR
  444-  453 (14.34/ 7.63)	GIkVEY.PHRR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP28763 with CDK8 domain of Kingdom Fungi
Unable to open file!