<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28727

Description Uncharacterized protein
SequenceMPLRLRPGYPHSSSSHHLFASSSSSSSSAHRLYTDGRDQSAGYQPKARVTERYRIIGFISSGTYGRVYKAVSRTGNGEGIAVAPIEVAIKKFKPDKEGEQVSYTGISQSAIREMSLCSELRHSNVIRLVEIILEDKCIFMVFEYAEHDLLQIIHHHTQQPRHPIPPATVKSIMFQLLNGCQYLHTNWVLHRDLKPANIMVTSGGEVKIGDLGLARRFDKPLHSLFSGDKVVVTIWYRAPELILGSYHYTPAIDMWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMHKIAEIMGMPTKERWPLLTCMPEYMQLNTLSAMQHSSHSHHHHSHHQNPPSRGYAPTSSLEKWYYSTINNNSGAGAAASGPNGQPALQSLGAEGYKLLAGLLEYDPEKRLTAAQALQSVFFSSGDRVSSNCFEGVKVEYPHRRVSQDDNDIRTSSLPGTKRSGLPDDTLLRPAKRMKE
Length469
PositionKinase
OrganismHypocrea virens (strain Gv29-8 / FGSC 10586) (Gliocladium virens) (Trichoderma virens)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Hypocreaceae> Trichoderma.
Aromaticity0.08
Grand average of hydropathy-0.438
Instability index48.25
Isoelectric point9.15
Molecular weight52476.16
Publications
PubMed=21501500

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP28727
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.79|      24|     174|     143|     166|       1
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  143-  166 (47.00/28.62)	EYAEHDLLQIIHH....HTQQPRHPIPP
  314-  341 (42.80/25.45)	EYMQLNTLSAMQHsshsHHHHSHHQNPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     309.68|     101|     350|       8|     121|       2
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    8-  121 (154.17/138.14)	GYPHSSSSHHLFASSSSSSSSA.............HRLYTDGRDQSAG...YQPKARVTERYRIIG.FISSGtyGRVykavsRTGNGEGIAVapiEVAIKKFKPDKEG.EQVSYTGISQSAIREMSLcseLR
  344-  462 (155.51/105.30)	GYAPTSSLEKWYYSTINNNSGAgaaasgpngqpalQSLGAEGYKLLAGlleYDPEKRLTAAQALQSvFFSSG..DRV.....SSNCFEGVKV...EYPHRRVSQDDNDiRTSSLPGTKRSGLPDDTL...LR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP28727 with CDK8 domain of Kingdom Fungi
Unable to open file!