<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28536

Description Adenine nucleotide alpha hydrolase-like domain kinase
SequenceMSRSIQEKKLAAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQHLLLVHVRQKASSIPTTSRAYMRQMDNESKELFSSFRVFCNRKNILCKEVLLEDMDVSKAIIEGIREYSIELLVLGAPSRSGLVRRFRTSDVPSLVSKGAPEFCTVYIISKGKIQSVKTATSPLTLKAMPRNALQPPQQPQQSPNRIDVQQQKRNHPLRCISPFTRGARPTHISYESSISDSDISFVSSGRPSIDRMFHSLYEEMDSGNGITPRISGSSDYDLRSFGSLYSGVKSIDHNDYSFTSQGSGRSGMSMSSQSRISNSDKVEAEMRRLRLELKQTMEMYSTACKEALTAKQKALELQRWKLDEERKMEDTRFCEETSLAVAEKERAKCKVAMEAAEASRKIAELEAQKRMKVEIKSNSDSDQRKRTFGDSVLNSPARYRRYTIEEIEEATNYFSNSLKIGEGGYGPVYRAELDHTAVAIKVLKPDAAQGRSQFQQEVEVLSSIRHPHMVLLLGACPEFGCLVYEHMTNGSLDDCLFRRNNSKLPVLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQMITARPPMGLSHHVARSIEKGTFDEMLDPAVEDWPIEQAMHFAKLAIQCAEMRRKDRPDLGKVILPELNKLRDFADENMPMMMMMFGGGAGFAQRNNNYSRSRFSSSIQGSMSESQSLSEMSGYEGRSSSTSVGKM
Length774
PositionTail
OrganismMedicago truncatula (Barrel medic) (Medicago tribuloides)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
Aromaticity0.07
Grand average of hydropathy-0.467
Instability index57.56
Isoelectric point8.98
Molecular weight86943.38
Publications
PubMed=22089132
PubMed=24767513

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP28536
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      85.44|      13|      19|     262|     274|       1
---------------------------------------------------------------------------
  223-  232 (18.68/10.11)	DSDI.SFVS........SG
  235-  252 (16.03/ 7.56)	SID.RMFHSLYeemdsgNG
  262-  274 (27.23/18.36)	DYDLRSFGSLY......SG
  282-  294 (23.50/14.76)	DYSFTSQGSGR......SG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.43|      18|      20|     363|     381|       2
---------------------------------------------------------------------------
  363-  381 (24.74/25.48)	ETSLAVAEKErAKCKVAME
  384-  401 (28.70/22.96)	EASRKIAELE.AQKRMKVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     130.08|      39|      50|     608|     647|       3
---------------------------------------------------------------------------
  608-  647 (67.29/45.95)	GTF.CYIDPEYQQTGmLGTKSDIYSLGIMLLQMITA.RPPMG
  659-  699 (62.79/38.01)	GTFdEMLDPAVEDWP.IEQAMHFAKLAIQCAEMRRKdRPDLG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.32|      18|      20|     103|     120|       4
---------------------------------------------------------------------------
  103-  120 (29.87/18.75)	IIEGIREYSIELLV.LGAP
  125-  143 (26.44/15.82)	LVRRFRTSDVPSLVsKGAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.87|      10|      19|     405|     414|       5
---------------------------------------------------------------------------
  405-  414 (17.68/10.89)	NSDSDQRKRT
  421-  430 (19.18/12.48)	NSPARYRRYT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP28536 with Med32 domain of Kingdom Viridiplantae
Unable to open file!