<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28511
Description |
ATP-dependent DNA helicase |
Sequence | MENYEVLEELHNVEAEIEDVQEKIRALIEKQERLYERKSELNSILDACKESENQVNNAASSSAVENWNGTFEWDSQADDLRLNIFGISSYRANQKEIINAILSGRDVLVIMAAGGGKSLCYQLPAVLRNGVALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKVYIQSFWRRARGDLKLLYVTPEKITKKQEIYEAHCCSQWGHDFRPDYKNLGILKTQFPNVPMVALTATATQRVQNDLVEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVVVDEIAEFIQESYPNHESGIVYCFSRKECEQVAKELRERGISAGHYHADMDVNDREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFSCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQLVEKMKTKQKEIGSYLKREEMEQLILHLLLERALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEISTEEKTKASARLKRSLGSSGLELKLDELRKELSSNHGGILPHSVLSTQQISLLCSQKPNSLEELEKAIGKLKTEKYGNKILAQIVKYSDFELTDEQVNDGRAAKRSKTKKNLVLIETSEDEA |
Length | 685 |
Position | Unknown |
Organism | Medicago truncatula (Barrel medic) (Medicago tribuloides) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.428 |
Instability index | 49.37 |
Isoelectric point | 6.97 |
Molecular weight | 77915.17 |
Publications | PubMed=22089132
PubMed=24767513
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Function
Annotated function |
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GO - Cellular Component | chromosome GO:0005694 IBA:GO_Central
cytoplasm GO:0005737 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
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GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IBA:GO_Central
ATP binding GO:0005524 IEA:UniProtKB-KW
four-way junction helicase activity GO:0009378 IBA:GO_Central
nucleic acid binding GO:0003676 IEA:InterPro
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GO - Biological Process | DNA duplex unwinding GO:0032508 IBA:GO_Central
DNA recombination GO:0006310 IBA:GO_Central
DNA repair GO:0006281 IBA:GO_Central
DNA unwinding involved in DNA replication GO:0006268 IBA:GO_Central
double-strand break repair via homologous recombination GO:0000724 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP28511
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 116.41| 34| 407| 190| 225| 1
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190- 225 (59.54/42.96) PEKITKKQEIyeAHCCSQWGHDFRPDYKNLGILKTQ
604- 637 (56.87/34.51) PHSVLSTQQI..SLLCSQKPNSLEELEKAIGKLKTE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 187.39| 60| 407| 40| 102| 2
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40- 102 (87.32/73.32) ELNSILDACKESeNQVNNAASSSAVENWNGTFEwDSQADDLRLNIFG.ISSYRANQKEiINAIL
450- 510 (100.07/67.74) ECNGMCDICAFS.CEVNEVDVSRHAKLMVSLLQ.DIQASDQRSTMLQlVEKMKTKQKE.IGSYL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.82| 39| 209| 147| 187| 3
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147- 187 (59.02/48.05) MGLTALGIPaYMLTSTTSKDNEKVYIQSFwRRARGDLK...LLY
358- 399 (65.80/42.58) MGINKPDVR.FVIHHSLSKSMETYYQESG.RAGRDGLPsecLLY
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