<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28496

Description Adenine nucleotide alpha hydrolase-like domain kinase
SequenceMSLQEPSGPPQQNVTMVAVDKGKSSAYAFRWAIRCIDNPIIIAVHVKNKNLLNQGTNVYPPDEDEVAQIFNNLRALCPSKMVTMKEVVVDDQDVVKGLLDFANRNLVHSLVIGASTKNLMPSLKKFKASQDIPTSIIKSAPGYCSVYIISKLKIVSTRPAVREIGNQIIPTKQLAVQVSPEFESGIRSIQPRTSGTNEGSESRSFDSISTVKGPARDRPRSAGSNQSMDNIDPSGGRGRHWASMDEREIAALGPIVDVNRHELYLIDSFGTHPTSHTSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRRWKEEEGRKVVEVRLSQEAALAIAEREKAKAKAALEAAEEAKRKAEQEAQRRKEAEMKARKEAEERNKVLNALAQNDNRYRKYTMMEIEVATERFSPSKKLGEGGYGPVFKGHLHHTPVAVKLLNPEAAQGRKQFNQEVEVLSSIRHPNMVLLLGACPEHCCLVYEYMENGTLEDRLFRKNNSKPLSWQKRFKIAAEIATALLFLHQTKPEPIVHRDLKPSNILLDKNYVSKVADVGLARLVPPSVADSVTQYYMTSAAGTFCYIDPEYQQTGMLTPKSDIYSLGIMLLQIITARPPMGLSHHVKRAIEKDQFSEILDSAVTDWPVEEALSFAKLALNCAELCKKDRPNLASVVLPELNRLRGLGFNDNQVFTDTKNNSHSLRPPMPT
Length705
PositionTail
OrganismMedicago truncatula (Barrel medic) (Medicago tribuloides)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
Aromaticity0.06
Grand average of hydropathy-0.458
Instability index42.17
Isoelectric point8.98
Molecular weight78745.32
Publications
PubMed=22089132
PubMed=24767513

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP28496
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.34|      37|      79|     366|     404|       1
---------------------------------------------------------------------------
  282-  323 (33.44/16.79)	.....EAEMKrLRLEL......KQTMDMYSSAckqaisAKNQaEQIRRWKEEE
  324-  361 (32.16/16.44)	G..RKVVEVR.LSQEAalaiaeREKAKAKAAL......EAAE.EAKRK.....
  366-  404 (55.74/39.47)	AqrRKEAEMK.ARKEA......EERNKVLNAL......AQND.NRYRKYTMME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.74|      14|      20|     203|     218|       2
---------------------------------------------------------------------------
  203-  218 (18.86/13.18)	RSFDSISTVKGpaRDR
  226-  239 (24.87/11.10)	QSMDNIDPSGG..RGR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     307.77|      85|     580|      39|     124|       3
---------------------------------------------------------------------------
   39-  124 (140.56/89.04)	PIIIAVHVK...NKN....LLNQGTNVYPPDED.EVAQIFNNLRALCPSKMVTMKEVVVDDQDVVKGLLDFaNRNLVHSLVIGASTKNLMPSLK
  533-  576 (50.79/26.60)	...........................................RDLKPSNILLDKNYVSKVADV..GL....AR.LVPPSVADSVTQYYMTSAA
  614-  700 (116.42/69.42)	PMGLSHHVKraiEKDqfseILDSAVTDWPVEEAlSFAKLALNCAELCKKDRPNLASVVLPELNRLRG.LGF.NDNQVFT.....DTKNNSHSLR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP28496 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GIRSIQPRTSGTNEGSESRSFDSISTVKGPARDRPRSAGSNQSMDNIDPSGGRGRHWASM
2) KAALEAAEEAKRKAEQEAQRRKEAEMKARKEAEERNKVLN
185
349
244
388










Molecular Recognition Features






MoRF SequenceStartStop




NANANA