<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28485

Description Adenine nucleotide alpha hydrolase-like domain kinase
SequenceMASNGEEESSTVIAIDSDKNSQHAVKWAVDHLLDKYASCTLIHVRTKPFNSNEFDAIPKQGRPPTEEELHQFFLPFRGFCARKGIIAEELVLHDIDVPSALTDYIIDNSITDVVLGAPRWNNAFIRKFKDVDVPTSLVKSLPETCTVHIISRGKVQSIQATAPSQTITISSPKPDYLTKDLNRKSLNKIRRRLSSDGGSFGQKKDARIGSRCMSQRETYPRRISLSDDNQDSNSMETEINRLKQEQKRTKKKSRSASVGREAGFAKQKVINVHEEDEEERMTTSNEIERNKFIFKRYNIEEIEVATNYFDMDGKIGEGGYGPVFKGVLDNTDVAVKALRPDMTQGEKQFNQEVLVLGSIRHPNIVVLLGACPEFGCLIYEYLDNGSLEDRLFQRDNTPPIPWKTRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYVSKISDVGLARLVPPSVENKTTEYHKTNAAGTFFYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKTPMGVAHLVEEAIQNDNLAKVLDPNVTDWPVEEALSLAKLALKCCEMKKKDRPSLASVILPELKRLRDL
Length578
PositionTail
OrganismMedicago truncatula (Barrel medic) (Medicago tribuloides)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
Aromaticity0.07
Grand average of hydropathy-0.455
Instability index50.10
Isoelectric point6.88
Molecular weight65042.39
Publications
PubMed=22089132
PubMed=24767513

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP28485
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.80|      28|      28|     191|     218|       1
---------------------------------------------------------------------------
  191-  218 (48.51/33.58)	RRLS.SDGGSFGQKKDARIGSRCMSQRET
  221-  249 (42.28/28.36)	RRISlSDDNQDSNSMETEINRLKQEQKRT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.42|      21|      21|     519|     539|       2
---------------------------------------------------------------------------
  519-  539 (37.92/26.96)	EEAIQNDNLA.KVLDPNVTDWP
  541-  562 (32.50/22.11)	EEALSLAKLAlKCCEMKKKDRP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.87|      26|      27|     294|     320|       3
---------------------------------------------------------------------------
  294-  320 (41.72/36.62)	FKRYnIEEIEVATNYFDMDGKIGEGGY
  324-  349 (44.15/33.03)	FKGV.LDNTDVAVKALRPDMTQGEKQF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.63|      18|      25|     391|     409|       4
---------------------------------------------------------------------------
  391-  409 (31.24/19.54)	LFQRdNTPPIPWKTR.FKIA
  417-  435 (29.39/14.01)	LFLH.QTKPEPVVHRdLKPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.77|      10|      34|      92|     101|       5
---------------------------------------------------------------------------
   92-  101 (18.38/10.41)	LHDIDVPSAL
  128-  137 (18.39/10.42)	FKDVDVPTSL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP28485 with Med32 domain of Kingdom Viridiplantae
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