<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28483
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MAVEPALNSCIQAYVDSVLDLALSFFTRLRCYAKFCRTLASQAATAGNVSNQNMVASPAQNSTTPETSQGGENGTTISGGSTQMNAWVQEAIAKISSTSDGVSNLTPTSPIGGPSSLMPISINTETFPGTPAVRLIGDCHFLQRLCQLLFFCFFFKRSQLVLYMNGLRRTAETSLVRSDDGQTGRAGQIVHGSKGGEEPSLGHIRLGTGNSGQGYSFKEVKVIFQVLMDLCRRTSGLQHPLPVSQVGSNNIQVRLHYIEGNYTVLPEVLEASLATQVHNIPRPRGVDDTRLLLRKLELLPPAEVWHRLNMFGGPCTDPDDSPRPVRSNPLDSRSLESNNIDYGTNGLWPRKHRMIERDAAFALNTSLDIMGSRRDVITTSWKTGLEGVWYKCIRCMRQTSAFTSPASANIPNQNERESWWVSRWATNCPMCGGRWVRVV |
Length | 439 |
Position | Tail |
Organism | Medicago truncatula (Barrel medic) (Medicago tribuloides) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.277 |
Instability index | 50.04 |
Isoelectric point | 8.83 |
Molecular weight | 48300.31 |
Publications | PubMed=22089132
PubMed=24767513
|
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP28483
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 140.14| 39| 40| 343| 381| 1
---------------------------------------------------------------------------
343- 381 (69.93/52.97) GTNGLWPRKHRMIERDAAFALNTSLDI..MGSRRDVITTSW
384- 424 (70.20/53.20) GLEGVWYKCIRCMRQTSAFTSPASANIpnQNERESWWVSRW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.91| 31| 40| 38| 77| 2
---------------------------------------------------------------------------
41- 71 (53.47/40.91) SQAATAGNVSNQNMVA.....SPAQNSTTPETSQGG
78- 113 (49.44/20.24) SGGSTQMNAWVQEAIAkisstSDGVSNLTPTSPIGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 97.80| 23| 38| 275| 297| 3
---------------------------------------------------------------------------
239- 259 (22.67/10.00) ...HPLPVSQvGSNNIQVRLHYIE
275- 297 (39.46/22.41) TQVHNIPRPR.GVDDTRLLLRKLE
316- 336 (35.67/19.61) TDPDDSPRP...VRSNPLDSRSLE
---------------------------------------------------------------------------
|