<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28477
Description |
"Transcription cofactor, putative" |
Sequence | MVTNNWRPNQGAEPNMDTSDWRGQLQPESRQRIVNKMHLPVSGQEGLHELWKIAQRFEEKIYTAATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQVGPSNQPPYPDSLDSVAQTGQPNGGDWQEEIYQNIKAMKESYLPKLSEMIQKIATKLQQHDSLPQQPKSDELEMLKEFKMVLERLITFLQVSKSNISPCLKEKLGSCEKQIINCINTYRPNKMSSLDSTAKTGKPSGGDWQEEVYQKIKVMKESYLPELNEMYQKIATKLQQHDSLPHQPKSDQLEKLKVFKLMLERLITFLQVSKSNISPSLKEKLGSYEKQIINFINTNRPREMSSLQPGQLPPPHTHSMSQTQPQVTQRQQLHQMNDVNDMKMRQVIGVKPGVFEQHIGNALAPSSGKSTVTEELMDRLVKAVSSLTPAALSAAVSDTSSVISMIDRIAASAPGNGSIVSVGEDLVAMTNCHLQDRNFLPQDGVNGSRKMKRCINATPFDVVSSAGCVNDSIKQLNAIEASDLEPIATSIIKRPKIEF |
Length | 529 |
Position | Tail |
Organism | Medicago truncatula (Barrel medic) (Medicago tribuloides) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
|
Aromaticity | 0.05 |
Grand average of hydropathy | -0.586 |
Instability index | 52.80 |
Isoelectric point | 8.64 |
Molecular weight | 59251.10 |
Publications | PubMed=22089132
PubMed=24767513
|
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP28477
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 145.73| 22| 22| 142| 163| 1
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142- 163 (40.17/33.64) PKLS..EMIQKIATKLQQHDSLPQ
165- 188 (33.78/26.91) PKSDelEMLKEFKMVLERLITFLQ
255- 276 (40.05/33.52) PELN..EMYQKIATKLQQHDSLPH
278- 301 (31.72/24.73) PKSDqlEKLKVFKLMLERLITFLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 218.87| 64| 111| 112| 222| 2
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112- 222 (111.97/64.45) DSVAQTGQPNGGDWQEEIYQNIKAMKESYLpklsemiqkiatklqqhdslpqqpksdelemlkefkmvlerlitflqVSKSNISPCLKEKLGSCEKQIINCINTYRPNKMS
225- 335 (106.90/61.27) DSTAKTGKPSGGDWQEEVYQKIKVMKESYLpelnemyqkiatklqqhdslphqpksdqleklkvfklmlerlitflqVSKSNISPSLKEKLGSYEKQIINFINTNRPREMS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 72.20| 19| 21| 50| 68| 3
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31- 44 (17.72/ 8.86) .....QRIVNKMHLPVS.GQ
50- 68 (33.46/22.58) LWKIAQRFEEKIYTAAT.SQ
72- 87 (21.01/11.73) LRKISL....KMLTMETkSQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 98.26| 29| 104| 353| 382| 4
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353- 382 (48.04/36.75) TQPQVTQRQQLHQmNDVN.DMKMRQVIGVKP
460- 489 (50.22/33.13) TNCHLQDRNFLPQ.DGVNgSRKMKRCINATP
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