<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28442
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDLAYICEWEKWPKSTHCPSGPLACTWSCRNLIAFTTDLRSDDQDLTRMIHILDTEHPWDVHSIRSEHSEAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESPVGSVVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQLYKVCVSVVNEKCRIDTELLPSLFMRCTTDLSRRDRLPAITHLKFLARDMSEQVLLCASSQTSSVVECWSLRKEGLPVNNIFQQLSPAVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAIFYSSAAPRPIDEPALKRPRTTGPAVHFKAMQLSWTSLALVGIDNHGRLSMLRISPSMGHSLDVGLALRHLLFLLEYCMVTGYDWWDILLHVQPGMVQSLVEKLHEEYTRQKAELQQVLSTRILAMKASLCKLSPCTVTRVCDYHAKLFLIAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPTSEPDEALVDECCLLPSQLLIPSLDWLPVSDGLVSRLQPKQPLRLHFGKAPALPGSSTGLQLDGLIRAPGQPKMDHLRRLHLGAYPTEACKACTRCGCVTMLKSPNKTTAVKQWEQRWIKNCLCGGLWWRMPLSYP |
Length | 829 |
Position | Tail |
Organism | Bos taurus (Bovine) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Laurasiatheria> Artiodactyla> Ruminantia> Pecora> Bovidae>
Bovinae> Bos.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.019 |
Instability index | 49.42 |
Isoelectric point | 7.89 |
Molecular weight | 91832.73 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
thyroid hormone receptor binding GO:0046966 IEA:Ensembl
transcription coactivator activity GO:0003713 IEA:Ensembl
|
GO - Biological Process | positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 IEA:Ensembl
positive regulation of transcription, DNA-templated GO:0045893 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP28442
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 704.74| 187| 348| 293| 481| 1
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293- 481 (314.70/170.49) VVECWSLRKEGLPVNNIFQQ.LSP.......AVGDKQPTI.LKWRILSATNDLDRVSAVALPK..........L........PISLTNTDL...KVASDTQFY......PGLGLALAFHDGSVHIVHRL.SLQTMAIFYSSAAPRPIDEPALKRP...RTTG.PAV.HFKAMQL..SWTSLALVGIDNHGRLSMLRISPSM...GHSLDVGLALRHLLfLLEYCMVTGYdWWDILL
491- 647 (178.74/89.33) LVE..KLHEEYTRQKAELQQvLST....................RILAMKASLCKLSPCTVTRvcdyhaklflI........AISSTLKSLlrpHVLNTPDKS......PGDRLT....EICAKITD.V.DIDKVMINLKT......EEFVL..D...MNTL.QAL.Q.QLLQWvgDFVLYLLASLPNQG..SPLRPGHSFlrdGTSL..GM.LRELM..................
649- 826 (211.30/107.39) VIRIWGL..............LKPsclpvytATSDTQDSMsLLFRLLT..............K..........LwiccrdegPTS..EPDE...ALVDECCLLpsqlliPSLDW.LPVSDG...LVSRLqPKQPLRLHFGKAPALPGSSTGLQLDgliRAPGqPKMdHLRRLHL.gAYPTEACKACTRCGCVTMLK.SPN.....KTTAVKQWEQR...WIKNCLCGGL.WWRMPL
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