<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>
Description
Uncharacterized protein Sequence MELLECTNDEPWNRTIFEHLISVMITFMLNSTVRFNEIVVKLNSKLEGRTWTKSSHYVMWFVLNATSGFIGKNMLTDFVPCLRLFDILFPEAEDPDRAIDLPIPCCSRKDSTGQSNDSEISLTQKDGVLPKNILGKELSSTTENTKLSVSQFPISKKMDIDSSDLNRELVTYRDNENEVQEQSSTSAEDSDNECIQNETESLLPPHFRSSTACWKRQGRLLHLATAPVCLWQHVLRKSRLGQDHLPRVMPPALRPIESRISRRMQALVQSVSSTQISNSSVHLVSKLTWNQLFVVLNAFSTDNEVSQLIQRLIDIFWTNETAKDNQKLEHGVLWSRLIKNGKVDFPYDLSAYGRLQPLSHHLMRTMSVHVRMLVLHFFLQKFSVLPNSNMLSTPAIIETFCRILACREVESNNVNRILCLLTKLQPLWSYNTSNTEPKYAVLCGTTEPKVSNYFSCSLVFTLLDTLGFRLADILTPEVRIHTLTSLIGLVKLWSNWSTSVLDNKEPKNLCDGGTSEIPIELQYLLDWNIIKFARSIQAPDCVIYGFCSALTSSTLTQTQPGTNSLHSVNNSACVSQPQSSNIMSQQGSGLVNNTTSGSVSMIRPFIPVNTGVLTSISSSSIIQPPNDPILSSNTGVNSLTGGSGSTGFPNSIPGYPFLMCDNVEVNRFVLYSLLQMYHTFDLEEASGIRPNLVEQIRSMCEQCGPNSLIDLPQLITKRLPDFLILVIRQLTNPNTGELNIGSLPSSDPMNVESMESTLPYTDKSISLSKLCSMVQEEYTSFSNRNFEWSDAVSRSNMFLCLLHHISVRFLNRQLRMLCDYIVSSLTFTAQVNFTTDKCLSTLSDFCIRWHVIPLDRFLLFLANPNNSDSNTQRKSPHSDPLSSRDWFSCIRALHEIIPDQWITYPKTCTISCNTSNDSLEETDKPPHLPVSYGHLLLRLLPLLEVVIMQFLMCEVPFVLLIPFCRAIAPLFRYHRRPVNVCYTVLHDHAEFTMKGLLCKSNIGYPAYHLQLSDTKYLDTSPSSESDMDKTPWIVDRLLCQLLVHCIISKHQRLAMKAALNRSSKGFDQQHSSVNGIFTQQGWNNLLLCVKQSEVFYDVICRNLSNVSSDCNIVHDNTDQSVMNILLNPESFETQFRSMFMTWYSCNIFKYNWEYLFGLIDPICKTNQRHGIYGHSAAWRIWNYEESVCIQTAGLYAASIELMSSFMSPSELTSVVSDLLTNCAKHMYFNQLLNITGALAVILPSVYRFPLFKFCVTLFNDPILCDTTPESNPVDPESMFTCISDVKSTNDHNTNTKWRRSSRALRHRKLLDVNLTSVDNVTLASEATSFKDENSALLKPPKVALYFFEKYLPLDQKTDSDLVDILSNGGCSVIEMSHQNTEASKTLKENFNNLEFSSDVMEYLVKANLWHSIWAHANTSHLASLPGIFSDLILPELRTEAQLLMAFYLVAPLMGSLHSERPAKLVDLTAELYRAVWKVDTVLAKSNYEKSHHSEISIDISNSKQLGEHLPSETGVPLVHVDTIADLLYHIKYMYVGNGVLDQVRPLLPQLRPSLRKRLKFILPQDSSVSQQQQNQNGSHPIFENRVYRASIKPPMCNGDF Length 1600 Position Tail Organism Schistosoma mansoni (Blood fluke) Kingdom Metazoa Lineage Aromaticity 0.08 Grand average of hydropathy -0.148 Instability index 45.89 Isoelectric point 6.17 Molecular weight 181091.19 Publications
Function
Annotated function
GO - Cellular Component GO - Biological Function GO - Biological Process
Interaction
Repeat regions
Repeats
>MDP28395
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 190.26| 44| 44| 810| 853| 1
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770- 807 (50.73/28.36) .......LCSMVQEEYTSFSNRNFEWSDAVSRSNMFlCLL.HH.ISV
810- 853 (78.54/48.48) LNRQLRMLCDYIVSSLTFTAQVNFTTDKCLSTLSDF.CIR.WH.VIP
854- 898 (61.00/35.79) LDRFLLFLAN.PNNSDSNTQRKSPHSDP.LSSRDWFsCIRaLHeIIP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 97.27| 27| 712| 539| 581| 2
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555- 581 (47.69/48.08) LTQTQPGTNSLHSVNNSACVSQPQSSN
1263- 1289 (49.58/19.36) LCDTTPESNPVDPESMFTCISDVKSTN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 35.62| 10| 15| 206| 215| 3
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206- 215 (20.06/10.22) HFRSSTAC.WK
222- 232 (15.56/ 6.29) HLATAPVClWQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.03| 10| 383| 82| 91| 4
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82- 91 (19.74/11.90) LRLFDILFPE
468- 477 (19.29/11.44) FRLADILTPE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.55| 15| 15| 303| 317| 7
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303- 317 (26.70/16.53) NEVSQLIQRL.IDIFW
319- 334 (22.85/13.09) NETAKDNQKLeHGVLW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.43| 24| 44| 582| 607| 8
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582- 607 (37.10/32.92) IMSqQGSGlVNNTTSGSVSMIRP.FIP
629- 653 (40.33/25.48) ILS.SNTG.VNSLTGGSGSTGFPnSIP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 33.71| 9| 44| 371| 389| 11
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360- 368 (17.14/ 9.19) HHLMRTMSV
376- 384 (16.57/ 8.56) HFFLQKFSV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.37| 22| 36| 406| 427| 13
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406- 427 (38.24/21.89) CREVESNNVNRILC..LLTKLQPL
443- 466 (35.13/19.51) CGTTEPKVSNYFSCslVFTLLDTL
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Explaination for Stockholm format The "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column. It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column. This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.#=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.
Alignment of MDP28395 with Med23 domain of Kingdom Metazoa
Intrinsically Disordered Regions
IDR Sequence Start Stop
1) LVTYRDNENEVQEQSSTSAEDSDNECIQNETES 169 201
