Description | Mediator complex subunit 25 |
Sequence | MVPGSEGPARAGSVVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDYGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLFDDFKKMREQIGQTHRVCLLICNSPPYLLPAVESTTYSGCTTENLVQQIGERGIHFSIVSPRKLPALRLLFEKAAPPALLEPLQPLTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGAALSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDANTKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDLESLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQVITNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMEDDILMDLI |
Length | 747 |
Position | Unknown |
Organism | Gorilla gorilla gorilla (Western lowland gorilla) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini> Hominidae> Gorilla. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.238 |
Instability index | 60.25 |
Isoelectric point | 8.61 |
Molecular weight | 78155.81 |
Publications | PubMed=22398555 |
Annotated function |
ECO:0000256 RuleBase:RU364144 |
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central nucleoplasm GO:0005654 IEA:Ensembl transcription regulator complex GO:0005667 IBA:GO_Central |
GO - Biological Function | |
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP28188 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 372.41| 48| 60| 614| 661| 1 --------------------------------------------------------------------------- 238- 275 (49.01/ 8.38) PLQSKQPVPLPPAAPSGAalSAAP..Q......QPLPP...VP...P....Q...YQvP 311- 340 (57.34/11.38) QAAPGVGPP....FSQAP..A..P..Q.....L.PPG.........PPGAPK...PP.P 560- 596 (50.13/ 8.78) GGQQAPPGLGPILEDQAR..PSQNllQLRP................PQPQPQ...GT.V 597- 622 (51.05/ 9.11) GAS.................GATG..Q.......PQPQGTAQP...PPGAPQ...GP.P 623- 673 (94.51/24.81) GAASGPPPPGPILRPQNP..GANP..QLRSLLLNPPPPQTGVP...PPQASLhhlQP.P 674- 715 (70.37/16.09) GAPALLPPP.....HQGL..G.QP..QLGPPLLHPPPAQ.SWPaqlPPRAPL......P --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 108.82| 31| 110| 39| 69| 2 --------------------------------------------------------------------------- 39- 69 (58.34/29.37) YLLPAIEYFNGGPPAETDFGGDYG..GTQYSLV 151- 183 (50.47/24.50) YLLPAVESTTYSGCTTENLVQQIGerGIHFSIV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 65.62| 19| 20| 350| 369| 3 --------------------------------------------------------------------------- 350- 369 (34.03/14.64) VAPG..SGLAPtAQPGAPSMAG 371- 391 (31.59/10.05) VAPGgvSGPSP.AQLGAPALGG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 71.62| 22| 25| 464| 487| 4 --------------------------------------------------------------------------- 464- 487 (34.11/30.68) LFrnSRMVQF.HFTNKDLESLKGLY 493- 515 (37.50/26.08) GF..AGCVHFpHTAPCEVRVLMLLY --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 49.71| 15| 23| 422| 436| 7 --------------------------------------------------------------------------- 422- 436 (28.29/21.94) KLTRSL.PCQVYVNHG 447- 462 (21.42/14.27) KLIMQLiPQQLLTTLG --------------------------------------------------------------------------- |
IDR Sequence | Start | Stop |
1) GSAPGPLQSKQPVPLPPAAPSGAALSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALG 2) HKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMEDDILMD | 233 544 | 390 745 |
MoRF Sequence | Start | Stop |
1) LMDLI | 743 | 747 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab