<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP28085
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MLDTAMPVGLGGVEDLFGDEVPLSIPPKTQGRHLYQRLDELRNRGCCQTVAWSRAGNIASISPDGMNLELRMLRAHPSNGVWNLSEPTTTDLVKGSVVNPLVHLEWSPTTAPDLAVFDSVGRVMIMNFPVSLNNAYVNRKWDADTVDDMNVVVGCHWLPVAPLSQYGPATKPSKSHRVYQYESSFVHAIGPHHPHMSKSALFCVTMGGLLKMYWSQNNGRIEETTMELESVCSSDELVTHASLATDKKYIIIVVTTATKKLKVIKLEIQWAGPGAVQEKTQLSQTARLNPSLVEDHLATIDWLQMVDEPSLPEFTTLQALPSIIDNGGKAGLPLIIGVRARSSGVGGFEMMQTVIDRWECAEQKSAIQTAFEQIGSRRNSVSNIQELPISTRLKRLDPITINKTVIGVQASQYGKALVFIMSDGSVEHRDRFTFEELYTTTNESRIMNLREAGWAFSEEGPCYQAAFSPTQCSMIQIGDDGKLKWSKLQHAQGDIGDSNNDGVYCASIAGLSIAAAGCVHTQANFDDLLAIAHPLADKKRFTQDWIQELIRILKIQVDYSQESHHESLMRNNSLHACMSIMNSLGFKGELAPRSFQSKFANVFLNVRIIVILTTVACNTPLQARDKVSPLDEPGKSFISYNTCLPLTHSDRIIEVVEALAGELKWSIDLLAWILDCLFELMSDETFVQHLNGKLSTAAEYLQERNDVALHVLLCSSTRSFLLAMCRRIAHLDGISFRAVEFYRKEAAEAEQSGVARLPSGQLQQAYQRMQRVTSTSLVPVGEFEKMLNTLGHDVKQAYAVYLPALLKQSSHPPQGKQIDHMVRSSQAQMEMVMLVSRQVPPAFMPLIKKFLMDDLRAMRAQTDPAQLFFADYAALGVQDDACSLAARAARGGSYYDVFKRVELRPSATLAVKPWRRCVRCPAVMEDVSSNRPGVTYVVAQQRKCSCGGSWGLLAKDKLVL |
Length | 960 |
Position | Tail |
Organism | Cordyceps militaris (strain CM01) (Caterpillar fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Cordycipitaceae> Cordyceps.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.131 |
Instability index | 42.22 |
Isoelectric point | 6.51 |
Molecular weight | 106453.01 |
Publications | PubMed=22112802
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP28085
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.26| 23| 244| 139| 169| 6
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139- 169 (33.10/40.73) RKWDADTVDdmNVVVGCHwlpvapLSQYGPA
394- 416 (40.17/23.79) KRLDPITIN..KTVIGVQ......ASQYGKA
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