<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27964
Description |
Mediator of RNA polymerase II transcription subunit 18 |
Sequence | MYEVFLSTIVADEDIKATCSILAGLCAMPPWESLHRVLYFKGPSRPNGISNQNSIVKSQRKDVPGLWKDLHQQLSRQSYVIQARYEVFKDKDFGTETPADFDARAGVLRWTDFPDPPHKGSAVTQRKKNEIWEQRNLPSIMRDNKYQLKSEAIEETFQFYRDDAEFCLFRHYQLPPTPDGTPLARVGAWETGFTPSDPARRWIFLVKVHVLQDNKPDEILKAHEQLANIRRDLEGVFEFKTFDRRIHDTRVAVEMRNAPAPLPQVIRAT |
Length | 269 |
Position | Head |
Organism | Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) (Verticillium wilt) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Glomerellales> Plectosphaerellaceae> Verticillium.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.600 |
Instability index | 51.45 |
Isoelectric point | 7.74 |
Molecular weight | 31155.01 |
Publications | PubMed=21829347
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364150
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP27964
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.91| 12| 18| 82| 93| 1
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82- 93 (22.13/12.21) QARYEVFKDKDF
102- 113 (22.78/12.74) DARAGVLRWTDF
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|