<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27919
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MAPPVVLTVRSYVPEDTSSYHQETQSIIDRWEILLDQPQALHPAFEQLASKNGTASVPPTMTRLRKLEPIVLPKVIVTVTTAQSGRVLCFAFSDGTVQYRNRFTMEEIYNESDTESIMHPLQVGFHFTNDTPCLQVAFSPTNCSFVQLCEDLTVKWNRLHYPLEDQGASLESADQKAVLAALTVALSATLNQGSGSCDDILAMARPFDRIPDFASAWVREMVNMFKIVVDYSEAAHHEQLVKNTPLQHCLSVISHLSFRGDFKPRSRSGRFAMLALGIRSVIVVLTVAANTSMSMRERGNPMDDPDVVDAVTGCARWGTSLLAWLTDSLFQLLEDPEMAAMLNSPKRFPELAKYLESKNHVALQLLLCSFTRGCLSALCRRLQLVESVSNRTAQYYETRFQQQQQQQQQQQQQDSAAGAAASSRPHPALVQAYQRMERVMSSALVKVSWFDRILSELSSDIQAAYQKSLSGLVAANVKPQAPNLTEQQQQQQNELFIKKAQAHFELDMLLGQNPPPSFREVLLKLFSVTLPAFRNQTDRAKLYFASYDLLEVEDSPVTLAKRKAAGKYVDVFKRVELVVGPRPKRAASPEGGSNAAEGHHGSAAQRKGAAGGEETASAAGANGIGEDNGMASYRAALMGSWTGIGNDTGPQWRRCVRCAAVMSDLFTTKPGYNFVLSQQRKCVCGGSWGTLPRGT |
Length | 695 |
Position | Tail |
Organism | Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) (Sporotrichum thermophile) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Sordariomycetidae> Sordariales> Chaetomiaceae> Thermothelomyces.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.250 |
Instability index | 41.79 |
Isoelectric point | 7.55 |
Molecular weight | 76721.41 |
Publications | PubMed=21964414
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP27919
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 223.59| 73| 78| 339| 414| 1
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339- 414 (116.50/101.66) AAMLNSPKRFPELAK.YLESKNHVALQLLLCS.FTRgCLSALCRRLQLV..ESVSNRTAQyyETRFQQQQQQQQQQQQQD
417- 493 (107.09/80.16) AGAAASSRPHPALVQaYQRMERVMSSALVKVSwFDR.ILSELSSDIQAAyqKSLSGLVAA..NVKPQAPNLTEQQQQQQN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 97.68| 24| 25| 635| 658| 2
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623- 641 (30.31/15.61) .GIG.EDNGM....ASYRAALMGSW
642- 665 (48.68/29.11) TGIG.NDTGPQWRRCVRCAAVMSDL
668- 684 (18.69/ 7.07) TKPGyNFVLSQQRKCV.C.......
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