<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27770
Description |
Mediator of RNA polymerase II transcription subunit 4 |
Sequence | RELIEILAISRNQKLPQPGEESQILELLIQRDGEFQELMKLAVDQGKIHHEMQLLEKVVEKRDNDIQQLQKQLKEAEHILATAVYQAKEKLKSIEKARKGAISSEEIIKYAHRISASNAVCAPLTWVPGDPRRPYPTDLEMRSGLLGQMNNPSTNGVNGHLPGDALAAGRLPDVLAPQYPWQSSDMSMNMLPPNHSNDFMLEPPGHNKENEDDVEVMSTDSSSSSSDSD |
Length | 229 |
Position | Middle |
Organism | Meleagris gallopavo (Wild turkey) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda>
Coelurosauria> Aves> Neognathae> Galloanserae> Galliformes> Phasianidae>
Meleagridinae> Meleagris.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.675 |
Instability index | 56.18 |
Isoelectric point | 5.06 |
Molecular weight | 25554.49 |
Publications | PubMed=20838655
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364141
|
GO - Cellular Component | mediator complex GO:0016592 IEA:Ensembl
nucleoplasm GO:0005654 IEA:Ensembl
|
GO - Biological Function | thyroid hormone receptor binding GO:0046966 IEA:Ensembl
transcription coactivator activity GO:0003713 IEA:Ensembl
|
GO - Biological Process | positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 IEA:Ensembl
transcription by RNA polymerase II GO:0006366 IEA:Ensembl
|
Interaction
Repeat regions
Repeats |
>MDP27770
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 78.26| 26| 32| 9| 40| 1
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2- 29 (35.05/23.51) ELIEILAISRNQklPQPGEESQILELLI
34- 59 (43.21/34.61) EFQELMKLAVDQ..GKIHHEMQLLEKVV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.73| 21| 33| 60| 81| 2
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60- 81 (30.71/24.30) EK.RDNDIQQlQKQLKEAEHILA
95- 116 (30.01/18.83) EKaRKGAISS.EEIIKYAHRISA
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