Description | CBN-DPY-22 protein |
Sequence | MEPSNNDQAGPSRTPPPVLEEDRVVEKGVGSWFDGQPGQRMLRKANARMGTADVYIQSRDSEEDKLTPDRLKSGYMVPITPHEHQSLVFNAFENKLTRLERAPKKSFSMLASVIQKKGESSMNYDRDLKANRNGLPRFAVFNYKRILEDRCKFFSALSRGVSLDSLKMKIPSYRRKEFLFWEFFDYKIPYARAAWVTKFCGILNFHNASNSKKKSLLDVATLEMSQSSNRFIVYMVSKLYKVEEDDAAFKELMDMWDYSSGLILYMFHDGIMDKNEFLMDLTETFNVFFIRRHLQKPRILEKFALFYINFIEDISSSLIICRRTSTLLSQAMLMISEGSDLKRKFEAYKKGHIDECNQFEEWQMERTLFEMADIPIDQQPKTREERKKFYIKFFREMEEEPYFEEVPDQSMESHVLDHIEKELAAKKLFKMREKSKILKSIVKTEPDDMDTAGPSKSPEKAEDDSSSNSSDYEEITDGEMNWDGAASPATSTASNETSELVEDDATSSAQGTPGATPRKSPEATPVPDYDSDVTLTSDSSDGSSDSSRSSSPVKGSPIPLKPLHSPKEESPKQDFKYLRVGQKSQTASEMVSAGRYGDMTFPLWYQDGGVAVDPNYEDVLDFRNPTPPPMPAIDPIAVSSPTPSSTPSTPSATDLSGPQNEKDDSQEKETPERNSQDAEMAGTPQKDAEDPEASAEEDATPASEEDVLVDPRESQEAFEKLLSALEKDTKALSTDDDDSTDKSPNTPISDAAAMPPPALKPIEERSIDSAPRSVDAEPTESSPKSSDAPVAVEDEVMEVDKPEDVSARLNDSDVMIVEPPQNQHVDDGDVMVVAVVDARKEPEADEASEMKKELEELVEENMELVKHKLKFNEKWQTGPFHPGFMEWASSDERQRPLLLLSSMLQYLASVTPDSFVWNNLVVTKKERRHKMLPQLCGSPLDYLPCELHELPTLEGNEDMIESLRTRHLEIIRRSQAAEDKWIPAEAQVLKFDNIITTCVAIIGTMDSIDVEKKDAIQDAATRLFDFSEMSEQTAKREAQLRTKLMFKWCITEEREGSFRPVYVAKILRAAMDKSPDKKIGGWQVMDLVFNFMASEGPKHGRKMYQETFDACASLLIEMLHEKIFSHTEILQDLEKDLEIDYTNPLMSRQRKQKIPKPPRQPVQEPDESKLIQRPKKAITPKRLFMGKRMDLLERMLLVIPQVNVENSDEIRIRKTLLFGLHPADNFFFLQIRGIIKALSREFETKMYIQFNRSRHETSTTKKIRQPQLDEILRLFRAQTYNDQHIILERVVSHFIDGIGNFLSKGHDKVPAPEVANILCEMYEYSMDISSIFDFFEKIVPFLRDVDNKINTNRMDVIPDMYYTEVAFIFVSFFTKHFQRFILHERACSIVNQLWFLVHDMTTAEGYTVTCWGKVVATFIFFVRKTITEAGLVTEPFTAQDYQFLKIFPKPHTDELHTSCYNHDFPGNKLKIKASFLRYESFNDFKWIVANMSVNKKKKNGPRFTNCRYSFVVTAFKEACNHGRNFDRINELANYCANVTANDPPLVEYWLAGIRGLCFLGVDNGYAFKEMAQTIDISDCSTHYALSTFVLCLAGKGAFCIRRLLFDLAKFIFPLIHGPPPPPPSHQKSKKKSSKHPESPSSGEPGVCLALLIICGLMCGCDEPIAFSAHYKGVEVKKKRFANTADERIMNMFHWLELGESMFRLMCQLAQLLEALQSKSKDENLVLPKKFAVKDPLAEEDHREKAPYRPEFLFNIAKAVFLKICEQDWVTLRMFQYARMGAFNQVSMKTNCRGQLISRIATRRRTETENVPKLYEAHQISKKATIATVLDFMTLWNFRATLFDLNLMVTQISPEPNSRNLHHSALSADALTTEIGKAFKDMFANAYHAKINMPIVKPFEEFRLSDVNKYWLLAPLANNCTQPKNIPPQYPNGTVATKFLREVALLMETTPTTARQSLLQCSWALSRVPFINMVVSCLRIESGQQSKETFLQALYQQIQREVVRCHTRKAKLPYRMEHRECTILRMGLISHIYKEILKPSHVEAWGTLLFQVLFHGIINPDRERLIYDNTYDMLQNMILWTLVDGDTMNHNDRYGSYRARWPQYAGLIRKMRKVSNDKIKDTALQKFLPIGKCQLPTVTFKKYTTRTRNPAIVRRFVPGDGLKKGRYVYLPDAKTKTNTFDMAPEMTEGLQKGGWKYSMFQATRMDAVGKVVPNVLRTIIPHEHMQHFNKQSLVMSDAILSDSFLAAPEIEVTETLPEEAPVEEEEAVEETAVEKPMEPVAARALEAEKIAEVMPERAAEKEAEKEKPVEEMVSTPDTSSIVAPEVMEEATPPAAPLAPPTRGRGRKRTSGTARQPAGTRAKRTKSKVDVNDGGANLAPGSDIAPVVSGSGGTSSVTYHTTSDETRTNLKNMLNRKRNSIADSAAAAAAVAAAASSSSAMAPPGPSAYSGYPGPSGTMPSGNPVMVPPHPSAPPPPYNATAGRPPMPMGNQPGAMFQPPTTADMTPEERKQRMEQQMYEKLAQQKQFMDQQARMREQRERETKEHEERRAREEEQKRLDRLRAIEESNAIMERANRQREETRRQEETARRQEEARLQFEAEQQRLKQEREAEERRREQARQEQERQERMRREAEERARAEEQAKKEHEERVRREQERARWEAAEQARIAEEQRREYLRKEEEKRQEQMRLERERQEQERARAEAAAQREAEHRRMMEQQSRQMGQQAPPPPYNQQGQPPGYHQPSHGQQFMQQGQQLRQSPAFPQPQFGAPGFPQPGMPGTRLMPGKPDQAHAQQYQHTQNQAAISQKEKEKQYLQAKNLQAAAAGGQQQRFGDASSSFGRQQAPGAPGTMMGQPGPTQAAQSAQQRQTMQPNMGQQAQNRGQNAPGYQQQVQSGYQQQAMGQVPAQNQTPGQFGRDAAYQQQQQQQANQWSAQAQNQMSQQGQQQAQAQAQQFGRTTGQGQMGNQGPQQPQQQQRMVGMGQPGMTQAAMGQQAQMGQQRGAQPGMAQPGMAQPGMAQPGMARSGQQQQQMPQQQAQQQAQQQAQQQVQQQARQMSQMGAMGMGGQPGMGGHMGQQPQMGQPGMGGRQPQQAPQQAQRQMNPMGQPGMGGQPQQAQAQRQMMGADQQAQLQAQEQYRRMQQMQQQQRMAQQQGGQPRGQAQQPMGGMGAMGAPQQQQQMQQQQQMQGGQQQRYPGQYLNYYQQQQPPQN |
Length | 3208 |
Position | Kinase |
Organism | Caenorhabditis brenneri (Nematode worm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Rhabditina> Rhabditomorpha> Rhabditoidea> Rhabditidae> Peloderinae> Caenorhabditis. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.760 |
Instability index | 55.84 |
Isoelectric point | 6.45 |
Molecular weight | 364278.22 |
Publications |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP27571 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 8| 234.12| 20| 20| 3083| 3102| 1 --------------------------------------------------------------------------- 2917- 2939 (27.17/ 7.94) AA.....YQQQQQQQANQwsaQAQNQMS 2956- 2974 (29.38/ 9.29) TT.....GQGQMGNQGPQ...QPQQQ.Q 3056- 3076 (24.69/ 6.43) QM.gamgMGG.QPGMGGH...MGQQ..P 3077- 3100 (38.04/14.55) QM.gqpgMGGRQPQQAPQ...QAQRQMN 3101- 3120 (27.84/ 8.35) PM.gqpgMGG.QPQQA.....QAQRQM. 3140- 3164 (28.87/ 8.98) QMqqqqrMAQQQGGQPRG...QAQQPMG 3165- 3185 (32.80/11.37) GM...gaMGAPQQQQQMQ...Q.QQQMQ 3186- 3205 (25.32/ 6.82) GG.....QQQRYPGQYLN...YYQQQQP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 9| 395.21| 43| 44| 2577| 2619| 2 --------------------------------------------------------------------------- 2534- 2572 (44.20/14.54) REQ...RERE...T.KEHEERRAR.EEEQ...............................KR......LDRLRAIEE.......SN......AI...MER 2577- 2619 (68.07/26.59) REE.TRRQEE...TARRQEEARLQFEAEQ...............................QR......LKQEREAEE.......RR......RE...QAR 2646- 2677 (40.95/12.89) HEErVRREQE...RARW.EAA................................................EQARIAEE.......QR......RE...YLR 2678- 2727 (38.15/11.48) KEE.EKRQEQmrlERERQEQERARAEAAA...............................Q...........REAEH.......RRmmeqqsRQmgqQAP 2729- 2758 (39.86/12.34) PPY.NQQGQP...PGYHQPSHGQQFMQQG...............................QQ......LRQ............................. 2845- 2884 (46.33/15.61) GAP.G........TMMGQPGPTQAAQSAQ...............................QRqtmqpnMGQQ..AQ.........N......RG...QNA 2885- 2952 (31.99/ 8.37) PGY..QQQVQ...SGYQQQAMGQVPAQNQtpgqfgrdaayqqqqqqqanqwsaqaqnqmsQQ......GQQQAQAQA.......QQ.............. 2981- 3017 (32.36/ 8.56) .................QPGMTQAAMGQQ...............................AQ......MGQQRGAQPgmaqpgmAQ......PG...MAQ 3018- 3052 (53.29/19.12) PGM.ARSGQQ.......Q..QQMPQQQAQ...............................QQ......AQQ..QAQQ.......QV......QQ...QAR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 219.68| 70| 372| 759| 829| 3 --------------------------------------------------------------------------- 759- 829 (111.98/63.19) LKPIE.ERSIDSAPRSVDAEPTESSPKSSDAPVAVEDEVMEVDKPED........VSARLNDSDVMIVEPPQnQHVDDGD 1130- 1208 (107.70/56.79) LQDLEkDLEIDYTNPLMSRQRKQKIPKPPRQPVQEPDESKLIQRPKKaitpkrlfMGKRMDLLERMLLVIPQ.VNVENSD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 95.51| 23| 23| 2451| 2473| 4 --------------------------------------------------------------------------- 2422- 2444 (32.01/12.18) SAAA......AA.AVAAAASSS.S.AMAPPGP 2445- 2469 (39.10/16.66) SA....ysgyPG.PSGTMPSGN.P.VMVPPHP 2470- 2499 (24.40/ 7.38) SAPPppynatAGrPP..MPMGNqPgAMFQPPT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 65.45| 21| 21| 2260| 2280| 8 --------------------------------------------------------------------------- 2260- 2280 (35.56/17.62) PVEEEEAVEETAVEKPMEPVA 2282- 2302 (29.89/13.53) RALEAEKIAEVMPERAAEKEA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.88| 12| 25| 2157| 2168| 19 --------------------------------------------------------------------------- 2157- 2168 (24.24/15.78) P..GDGLKKGRYVY 2183- 2196 (20.64/12.07) PemTEGLQKGGWKY --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 37.26| 11| 20| 2793| 2803| 21 --------------------------------------------------------------------------- 2793- 2803 (22.06/14.30) QQYQHTQN.QAA 2811- 2822 (15.20/ 6.95) KQYLQAKNlQAA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 199.00| 70| 1629| 672| 752| 22 --------------------------------------------------------------------------- 672- 752 (102.32/89.18) ERNSQDAEMAGTPQKDA.EDPEasAEEDATPASeedvlvdPRESQEafEKLLSALEKD...TKALSTDDD.DSTDKSPN.TPISDAA 2303- 2383 (96.68/59.95) EKEKPVEEMVSTPDTSSiVAPE..VMEEATPPA..aplapPTRGRG..RKRTSGTARQpagTRAKRTKSKvDVNDGGANlAPGSDIA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AFEKLLSALE 2) FPLWYQ 3) KQDFKYLRVG 4) QQMQQQQQMQGGQQQRYPGQYLNYYQQQQPPQN 5) YEDVL | 717 601 572 3176 616 | 726 606 581 3208 620 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab