Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MEHQKDARLQDLKKDRSNAQGGDALHTQDAFNGQNSASQKAAANGQVTTSEATGLPTPPELDQSWRDGPDNKPMGVLIERLAQQCFTDLGTTLKTMAEIPESTQANGVVPHAVDTSVASLTKKRTLMDFAHNQRDRFIKTLVLSDWARNEQDMARLVDIKVWQERQLGAQVQAISSIGNTKHNMQGAKIPNPNLDGALELLATGTSRMPDLGYLPPKKLSAKQLLRTLQDMNVALATRLNLHEELPYYFNDLSIANGRATFRVADEFEVDLSLGDEDPSTPFWFIDMRFLFSPTPDITDDVSRMELEKRVNIALASESKLQGCYDLLHNFVLTHKINVLRDQASQLLREKWFDCLFVEMKKRVLIVQYWSDLAGPKSWLEIGVSTGKQNRKGSKPANAQLSVRWFRRGQEVLDDSPSIDWKTLNVEQVLGTLIAKHTSWDLRNTKNGLVKLAGSNSKLDMTLDACADTPEDCSLALGLPGMRTPYIVRKEVVTGKWAISPPTMLAARAERLMNADLKADPAVQLAQMLCGTNQERIGKAADLAGWISVSSRTLAPQNNLKALFGADTVSRSIYKCKRGWSDSWALVATFGLSGDKWWAARLEPKLEARGTSTGSIFAEARRISIPSDLLALSGVARSLLIRIEKLAVAQISLAVVTQDLDSKRIPYKIENTASLTPAERSRGERSSAASAEPAVVLDSASFFDDAKSDPLRKPFKDGSIRLTHDRNITSPPATDGSRAEVTHCLRLTVRHGVLNHLQEYLLTKPRDADMFMNDRGALALRVRVQFGQPCVSVLQARLRSCKRLDAYLVALARYSFVCTHLSLTRVTFTYPSNPDLSATVRFSTNPNAPPSADLKLHPTDSNPHQRVRVIALRTFNLAPLDPKSFTALLYTLRTSVSLNIAYSTISALPPLGSMHIHPHHLLAYLWTYSAPLPGAGAQFKIQWRPNVGEKKKGVWHIMTQLSKPNKGSGELREEVRMGIAEVCLKKGSGRIGNGTSIVVEDGLVGEVIRELDRVCREGGEAVDGKKEEEVKDVKVDTAAGSRPSVATQRTGSSTSVKTQGWQQKTAQMKSGGHAGLQQANGSGNGNGHRGSVTNGNGNANGNGRLKQEIIELD |
Length | 1112 |
Position | Tail |
Organism | Zymoseptoria tritici (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus) (Septoria tritici) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Dothideomycetidae> Mycosphaerellales> Mycosphaerellaceae> Zymoseptoria. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.378 |
Instability index | 32.85 |
Isoelectric point | 9.19 |
Molecular weight | 122205.65 |
Publications | PubMed=21695235 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP27567 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 83.46| 26| 33| 919| 951| 1 --------------------------------------------------------------------------- 919- 948 (39.87/41.18) HLLAYLwtySAPLPGAGaQFKIQWRPNVGE 955- 980 (43.58/21.90) HIMTQL...SKPNKGSG.ELREEVRMGIAE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.87| 13| 16| 126| 138| 4 --------------------------------------------------------------------------- 126- 138 (25.30/14.65) LMDFAHNQRD..RFI 143- 157 (19.58/ 9.81) LSDWARNEQDmaRLV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 108.36| 33| 33| 719| 751| 5 --------------------------------------------------------------------------- 719- 751 (56.94/37.06) IRLTHDRNITSPPATDGSRAE.VTHCLRLTVRHG 753- 786 (51.41/32.72) LNHLQEYLLTKPRDADMFMNDrGALALRVRVQFG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 157.11| 47| 50| 305| 352| 6 --------------------------------------------------------------------------- 305- 352 (76.84/47.27) ELEKRVNIALASeSKLQGCYDLLHNFVLTHKINVL.RDQASQLLREKWF 358- 405 (80.27/45.60) EMKKRVLIVQYW.SDLAGPKSWLEIGVSTGKQNRKgSKPANAQLSVRWF --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.88| 13| 16| 420| 432| 7 --------------------------------------------------------------------------- 420- 432 (22.17/16.05) WKTLNVEQVLGTL 439- 451 (22.72/16.65) WDLRNTKNGLVKL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 167.93| 58| 111| 465| 540| 8 --------------------------------------------------------------------------- 465- 540 (87.03/85.82) CADTPEDC.SL..ALGLPGMRTpyivrkevvtgkWAISPPTMLAAR..........AERL.MNADLKADPAVQlAQMLCgtnqeRIGKAA 575- 646 (80.90/46.82) CKRGWSDSwALvaTFGLSGDKW............WAARLEPKLEARgtstgsifaeARRIsIPSDLLALSGVA.RSLLI.....RIEKLA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GRLKQEIIELD 2) MEHQKDARLQDLKKDRS | 1102 1 | 1112 17 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab