<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27544

Description Uncharacterized protein
SequenceMKEASPDPPNIDGSRSGAQPAAPTAQGLNEHSNTQHKEFNEKQNGSSGSVNGGDRQGPIRNNSSLLKALSAGDIPSHTASQAARPGSVIETPNKAEEPSQENPNPTSKMNRFFAEVKRSVKISIFHSWLNILLIFVPVGIAVSQVDGINGGIVFGLNAVAIIPLAGLLAYATESVARKMGDALGALLNVTFGMSMLLGGLRFREQVYNSTVTQMSACLLSLSVISLVLPTAFHASFQDNDLADRQSLKISRGTSIVLLLVYVIYLMFQLKSHAYMYESTPQHIIDAELAPGPAAGLLDSSSSDDSSSSSSDSSDSDSSHGTMRKKMKKVLRNRRHRRSSTASVDTADTKGTRSASFTTTNTTPQDEVSEATASRHRFPRFPSYEGSESAIEEEDEEEAKRSRRRRRYRRHRHRKSKKQARDAKKAAGVTEAQNELPENAPQNNSECEPRRVDFAVQDDLEAGPSNTGKRPFPLRGLSVKNIPPVFTEKSTVASTPVPHVRYGIRRTNSLPDRLQFRAPGAMLPSSVPPILTAPGAQMIAKEQENEEDHLTQSGAIILLLVSTALVAVCAEFLVDSIKEVVETSGVNEVGIGLIILPIVGNAAEHVTAIKVAYKNHMDLAIGVAVGSSIQIALLLTPVMVILGWIMDKDMSLYFTLFETVCLFVSAFIVNFLVLDGRSNYLEGALLCAVYIIIAVVAFFYPNE
Length702
PositionKinase
OrganismFusarium oxysporum (strain Fo5176) (Fusarium vascular wilt)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium> Fusarium oxysporum species complex.
Aromaticity0.06
Grand average of hydropathy-0.178
Instability index56.76
Isoelectric point6.99
Molecular weight76085.49
Publications
PubMed=21942452

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process
transmembrane transport	GO:0055085	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27544
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.75|      25|      27|     355|     380|       1
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  355-  380 (39.45/30.87)	SFTTTNTTPQDE.VSEATASRHRfPRF
  382-  407 (37.30/23.51)	SYEGSESAIEEEdEEEAKRSRRR.RRY
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.81|      25|      27|     472|     497|       2
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  473-  497 (43.03/27.92)	LR.GLSVKN.IPPVFTEKSTVASTP..VP
  499-  527 (31.77/13.99)	VRyGIRRTNsLPDRLQFRAPGAMLPssVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     113.81|      29|      29|     166|     194|       3
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  132-  157 (33.68/23.16)	.LLIFVP...VGIAVSQVDGING........GIVFGLN
  166-  194 (45.75/34.33)	GLLAYAT...ESVARKMGDALGAL......LNVTFGMS
  198-  235 (34.38/23.81)	GGLRFREqvyNSTVTQMSACLLSLsvislvLPTAFHAS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.07|      14|      30|     305|     321|       4
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  305-  321 (19.90/18.02)	SSSSSSDSSDsdsSHGT
  338-  351 (24.16/12.93)	SSTASVDTAD...TKGT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.31|      35|     338|      79|     114|       5
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   79-  114 (56.55/42.29)	ASQAARPGSVIETPNKAEEPSQENpNPTSKMNRF.FA
  419-  454 (55.76/36.14)	ARDAKKAAGVTEAQNELPENAPQN.NSECEPRRVdFA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.93|      25|      30|     564|     591|       6
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  564-  591 (32.41/36.56)	LVAVCAEFlVDSIKevVETSGVNEVGIG
  597-  621 (42.52/32.99)	IVGNAAEH.VTAIK..VAYKNHMDLAIG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27544 with Med13 domain of Kingdom Fungi
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