<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27534
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MDITEAHQYRQTLFIFLLMMVLTRLAQSTHNALQDQIAALAKMPLPAAAMNGNSTVLNSDVEDGSGENIAKKTSILNFAMREHRKWVKALVITEWSRKADMVSKLIDLRFHLQGQEVLFSGALDVMGHVKRDLTFARMPSPDLKTALQVLSTGEAAWMPDLSYIEPPPLTRQEQIQWISDLDTQLSLRLNLEDFDKIPYHFRNYEIDSGRVTFKVAGEFEVDLTIADEDFEKQFWFIDFRFAFEPAASSIPDGLKNYLEGQVNDILSKDGLLGCYQFLHELVLTHKLNELKRQAIQLSRGSWTGTLKVEPLNRALAIQYWTSRAQLGSPKSWILIAVNSGRKPNGQPDPKSSSHLMVKWYRDNKEVKDTNISFDADNLSAETLLKTVIGRNVEFLLGSIHSRLQAFPRFQNRDAAMILNISHDDPATSFLSMQVGYKDSASLLVEPTTGVFAVKPHSKFTIQHEHLLNNGKNPADDGATCLENVRCGVMEDELIRRGSTTGWNTKKSPLSKDELRSLTNTREWTKTIWLQRTGWDPNWFVMVMLSPSGDAWWLVDASRNANGQSNRLSSKLPLNKGYPHLEDEFWNNLTLFATGMIAQAVDQHELYRHNIKFLLQDTRNWSLPQQVRLPTLEISLSDIFPSMVFNMAEKDNAKAANESNAGTETARLGPVAPTASTPGISTRQPWAHDIVSIRFKGVEPVDKEASGAGGPISDVSFMCISDAIIKVRKPTKFAMLKGHMVGRDVSWKARTGEFCLRMRSNIGLSILENLKARVKAVDRFVSFFESLDKARGFIKAESVSLKEVTFSYGPPASQTVEDAEVSRLWRVALNLSNNDIDIQVQETNPHLPVTDLMQKLVNGANGIGALMDWLPVSLPTMEAFKKIREAWSDIEARRQGRFKFIMNSTDEMSFQYLLAGTGPGNQQVQRSITFLGQIKQRRGEPWWHIERKIPSSGWPSLNDEFSAALKPVWDGKGDDWSGLVTGATGRPENGIIGLLLAIDEAIRPLAGSTFQNNSEVVILE |
Length | 1019 |
Position | Tail |
Organism | Fusarium oxysporum (strain Fo5176) (Fusarium vascular wilt) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium>
Fusarium oxysporum species complex.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.313 |
Instability index | 32.24 |
Isoelectric point | 6.44 |
Molecular weight | 114445.07 |
Publications | PubMed=21942452
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP27534
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 165.75| 48| 300| 235| 283| 2
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235- 283 (81.89/54.58) WFIDFRFAFEPAASSIPDGLKNyLEGQVNDILSKDGLLGCY.....QFLHELVL
538- 590 (83.85/51.07) WFVMVMLSPSGDAWWLVDASRN.ANGQSNRLSSKLPLNKGYphledEFWNNLTL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 168.58| 37| 200| 669| 705| 5
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669- 705 (65.36/46.17) P....VA.PTASTPG.ISTR..QPWAHDIVS...IRFKGVEPVDKEAS
870- 908 (50.73/33.95) P....VSlPTMEAFK..KIR..EAWS.DIEArrqGRFKFIMNSTDEMS
918- 961 (52.49/35.42) PgnqqVQ.RSITFLGqIKQRrgEPWWHIERK...IPSSGWPSLNDEFS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 80.39| 26| 201| 307| 344| 6
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308- 343 (38.41/46.70) VEPLNRALAIQywtsraqlgsPKSWILIA....VNSGRKP
444- 473 (41.98/18.04) VEPTTGVFAVK..........PHSKFTIQhehlLNNGKNP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.92| 13| 18| 490| 505| 7
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490- 502 (23.88/ 8.73) EDELIRRGSTTGW
511- 523 (22.04/11.46) KDELRSLTNTREW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 170.50| 54| 88| 81| 136| 8
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81- 136 (83.40/75.31) REHRKWVKALvITEWSRKADMvSKLIDLRFHLQGQEVLFS.GALDVMGHVKRDLTFA
172- 226 (87.11/68.16) QEQIQWISDL.DTQLSLRLNL.EDFDKIPYHFRNYEIDSGrVTFKVAGEFEVDLTIA
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