<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27533

Description Serine threonine kinase
SequenceMFPQFDESVPPNSTAVAIDKDKNSPHAVRWAIDHLIISNPLIILLHIRQKYNHQNSNGGYVESDSEMQQLFTPFRGYCARKGVLLKEVVIDDNDVPKAILEYIGRNLLNNIVVGASTRNALARKFKGVDISTTVMKSAPDFCSVYIISKGKILSVRTAQRPAANTATPPRQPSPGIPPQIPSDHGELDDPFRGQGMRGIPRGLATERLSWEKGSTPIRAAAHDRHRSSPSTLALDTIESTLPGRRSTGRDSFSDESDYSGPLAMGSLDISSKNLDFSSVPVSPRVSSASQSSRDLEAEMRRLKLELRQTMEMYSTACKEALNAKKKAKELNQWKIEEAQRFEEARMAEETALAIAEMEKAKCRAAIEAAEKAQKLADAEAQRRKQAELKAKREAEEKNRALTALAHNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLESNKSYGYAKREGHSHSGSGRTSHTRSNVPRSPPPLSSSSYSNSRISNPSSSQMEESSIEHEER
Length763
PositionTail
OrganismCitrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.06
Grand average of hydropathy-0.537
Instability index48.07
Isoelectric point8.92
Molecular weight84791.30
Publications
PubMed=29259619

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27533
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     253.55|      69|     449|     221|     293|       1
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  221-  293 (112.06/70.46)	AHDRHRSSPSTlaLDTIESTlpGRRSTGRDSFSD.....ESDYS...GPLAMGSLDISSKNLDFSSVPVS.PRVSSASQS.SR
  405-  464 (88.46/46.30)	AHNDVRYRKYT..IEEIEEA........TDKFSEamkigEGGY....GPVYRG.......KLDHTPVAIK.VLRPDAAQG.KR
  696-  744 (53.03/24.14)	......................GRKLESNKSY.........GYAkreGHSHSGSGRTSHTR...SNVPRSpPPLSSSSYSnSR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.47|      38|     289|     345|     385|       2
---------------------------------------------------------------------------
  311-  352 (56.69/43.56)	EMYSTACKEALNAKKKAKELNQwkiEEAQRFEE.....aRMAEE.....TAL
  356-  404 (51.78/31.26)	EMEKAKCRAAIEAAEKAQKLAD...AEAQRRKQaelkakREAEEknralTAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.44|      30|     116|      53|      82|       4
---------------------------------------------------------------------------
   53-   82 (57.86/28.26)	HQNSNGGYVESDSEMQQLFTPFRGYCAR...KG
  170-  202 (54.58/26.34)	RQPSPGIPPQIPSDHGELDDPFRGQGMRgipRG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27533 with Med32 domain of Kingdom Viridiplantae
Unable to open file!