<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27436

Description Uncharacterized protein
SequenceQISSNFSSIIAEKLRCNTLPDTGRRKPQVNQKDNFWLVTARSQSAIHAWFTDLAGTKPLTHLAKKVPIFGKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYSAFSETKMKKKHSVDPFIEWTQIITKYLWEQLQKMAEFYRPGPGSCISGSGSLSHELDTALRQWDYNEKLAMFMFQDGMLDRHEFLTWVLECFEKIRPGEDELLKLLLPLLLRYSGEFVQSAYLSRRLAYFCTRRLALQLDGVSGHPPHVLAAQPSNTLPPTPAPQPPTCSQSSTPFGELLQCPQHRPLVFGLSCILQSILLCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPGGNSAFTQQVRAKLREIEQQIKERGQAVEVRWSFDKCQETTAGFTIGRVLHTLEVLDSHSFERSDFSNSLDSLCNRIFGLGPSKDGHEISPDDDAVVVLLCEWAVSCKRSGRHRAMVVAKLLEKRQAEIEAERCGESEAVDEKGSISSGSLSAPTAPIFQDVLLQFLDTQAPMLTDPRSESERIEFFNLVLLFCELIRHDVFSHNIYTCTLISRGDLAFGASGPRPPSPFDDPPDDPERKDTEGSSSSKLEDPGLSESMDIDPGSSTLFEDMEKPDFSVRQAQAEGMFSPTMHCEGKGSPSPEKADGDKETKPLLKEKAEGNLGVLYEQPRHVQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHAIKKITKDIL
Length718
PositionKinase
OrganismMonodelphis domestica (Gray short-tailed opossum)
KingdomMetazoa
Lineage
Aromaticity0.08
Grand average of hydropathy-0.375
Instability index54.96
Isoelectric point5.95
Molecular weight80440.73
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27436
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.57|      25|     239|       2|      27|       1
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    2-   27 (40.25/20.67)	ISSNFSSIIAEKlRCNTLPDTGRRKP
  243-  267 (48.32/21.90)	VSGHPPHVLAAQ.PSNTLPPTPAPQP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.75|      25|     240|     317|     342|       2
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  272-  288 (24.05/ 8.22)	...............................QSSTPFGELLQCPQHRP
  289-  336 (30.65/14.01)	LVFGLScilqsillccpsalvwhysltdsRIKTGSPLDHLPIAPSNLP
  555-  575 (36.05/16.18)	LAFGAS.......................GPRPPSPFDDPPDDP....
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.94|      17|      55|     140|     173|       3
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  140-  162 (25.27/16.51)	RPGPGSCisgsgsLSHELDTALR
  197-  213 (28.67/19.72)	RPGEDEL......LKLLLPLLLR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.42|      24|      24|     605|     628|       8
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  588-  606 (31.52/18.60)	L.ED...PGLSESMDIDPG..SSTL
  607-  630 (42.77/28.17)	F.EDMEKPDFSVRQAQAEGMFSPTM
  631-  651 (24.13/12.31)	HcEGKGSP..SPEKADGDKETKP..
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27436 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GASGPRPPSPFDDPPDDPERKDTEGSSSSKLEDPGLSESMDIDPGSSTLFEDMEKPD
2) VRQAQAEGMFSPTMHCEGKGSPSPEKADGDKETKPLLKEKAEGNL
558
617
614
661










Molecular Recognition Features






MoRF SequenceStartStop




NANANA