Description | Mediator of RNA polymerase II transcription subunit 26 |
Sequence | MTAAPASPQQIRDRLLQAIDPQSNIRNMVAVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEPAHQHEVALRGLAGATGSANGGAHNCRPEVGAAGPPRSIHDLKSRNDLQRLPGQRLDRLGSRKRRGDQRDLGHPGPPPKVSKATHDPLVPNSSPLPTNGISGSPESFPGSLDGSGHAGPEGSRLERGENDKHGGKIPINAVRPHTSSPGLSKPPGPCLQAKASVLQQLDRVDETPGPPHPKGPPRCSFSPRNSRHEGSFARQQNLYVPKGSMPSPSPRPQTLDATQVPSPLPLAQPSTPPVRRPELLSSSESPVRWLEQPESHQRLAGPGCKAGLSPAEPLLSRAGFSPDSSKADSDAASSGGSDSKKKKRYRPRDYTVNLDGQVAEAGVKPVRLKERKLTFDPMTRQIKPLTQKEPVRADSPVHMEQPSRTELDKQEAKASLQSPFEQTNWKELSRNEIIQSYLSRQSSLLSSSGAQTPGAHHFMSEYLKQEESTRRGARQLHVLVPQSPPTDLPGLTREVTQDDLNRIQASQWPGVNGCQDTQGNWYDWTQCISLDPHGDDGRLNILPYVCLD |
Length | 600 |
Position | Unknown |
Organism | Callithrix jacchus (White-tufted-ear marmoset) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Primates> Haplorrhini> Platyrrhini> Cebidae> Callitrichinae> Callithrix> Callithrix. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.873 |
Instability index | 64.10 |
Isoelectric point | 9.51 |
Molecular weight | 65569.89 |
Publications | PubMed=25243066 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP27400 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 186.84| 40| 40| 119| 158| 1 --------------------------------------------------------------------------- 114- 150 (50.99/17.61) ....EVGAaGPPRSI....HDLK.......SRNDLQRL...PG..........QRLDRLGS.RKRR 151- 193 (48.25/16.28) GDQRDLGHpGPPPKVskatHDPL.......VPNS.SPL...PT..........NGIS..GSpESFP 212- 260 (51.05/17.65) GENDKHGGkIPINAV....RPHT.......SSPGLSKP...PGpclqakasvlQQLDRVD...ETP 295- 338 (36.55/10.57) ......GS.MPSPSP....RPQTldatqvpSPLPLAQPstpPV..........RRPELLSS.SESP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 98.82| 33| 129| 360| 408| 3 --------------------------------------------------------------------------- 265- 309 (55.59/13.89) PKGP..PRCSFSPRNSRHE.......GSFARQQNLYVPKgsmpspsprpqtLDA 362- 408 (43.23/41.78) PAEPllSRAGFSPDSSKADsdaassgGSDSKKKKRYRPR.......dytvnLDG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 106.10| 35| 62| 469| 506| 5 --------------------------------------------------------------------------- 469- 506 (53.07/46.07) QSPfeQTNWKELSRnEIIQSYLSR.QSSLLSS.SGAQ.TPG 534- 571 (53.03/34.20) QSP..PTDLPGLTR.EVTQDDLNRiQASQWPGvNGCQdTQG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 68.31| 21| 107| 339| 360| 6 --------------------------------------------------------------------------- 339- 360 (37.03/21.97) VR.....WLEQPeSHQRLAGPGCKAGL 443- 468 (31.27/14.17) VRadspvHMEQP.SRTELDKQEAKASL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IRDRLL 2) KKKKRYRPRDYTVNLD | 11 392 | 16 407 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab