Description | Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MAGVPAVRISIESACEKQVQEVGLDGTETYLQPLSMSQNLARLAQRIDFSQGSGSEEDDRDAHDWPDAADQDDDEGLVKFQPSLWPWDSVRNNLRGSLTEMCVLYDVLSIIRDKKFMTLDPVLQESLPPKQNPQTLQLISKKKSLAGAAQILLKGADRLTKSVAENQENKWQRDFNSELLRLRQHWKLRKVGDKILGDLSYRSAGSLFPHHGTFEVIKNTDIDLDKVIPEDYCPLDVQIPSDLEGSAYIKVSIQKKAPDIGDLGTVNLFRQPLPKPRSGSPYWQTKLEAAQNVLLCKEIFAQLSREAVQIKSPIPHIVVKNQIISQPFPGLQLSISLCHSSNDKKSQKSASDKQTPEDHLYVLEHNLHLLIREFHKQTLSSNMMPHPASAPFGHKRLRLSGPQAFDKNEINSLQSSEGLLEKIIKQAKHIFLRSRTARTIDSLASHIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNIGIDQIRVVHRDGRVIMLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPVESIGNASAITVASPSGDYAISVRNGPESGSKVMVQFPRCQCKDLPKSDVLQDGKWNHLRGPFKEVQWNKMEGRNFVYKMELLMSALTPC |
Length | 641 |
Position | Head |
Organism | Ornithorhynchus anatinus (Duckbill platypus) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Monotremata> Ornithorhynchidae> Ornithorhynchus. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.439 |
Instability index | 50.93 |
Isoelectric point | 6.88 |
Molecular weight | 72074.33 |
Publications | PubMed=18464734 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP27365 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 67.14| 20| 125| 297| 317| 4 --------------------------------------------------------------------------- 297- 317 (31.83/29.27) KEIFAQlSREAVQIKSPIPHI 428- 447 (35.31/26.89) KHIFLR.SRTARTIDSLASHI --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ARLAQRIDF 2) DRDAHDWPDAA | 41 59 | 49 69 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab