<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27337

Description Uncharacterized protein
SequencePPLLAHPQVSSNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQSTTSGVGPPFSQASAPQMAPGAPGAPKLPPTASQPNLVSTVTTGSGLAPQPQPGAPSLPTGVAPGGVSAAPQAPIGAPQLPGAQQSVTNKVLAWSGVLEWQEKPKPASVDANTKLTRSLPCQVYVNPGENLKTDQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDLESLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPFDQSGFVNGIRQVITNHKQVQQHKLEQQQQQRGVRVRPAASPPGGGVRPPPLSSPPSPSSSSSLPPPPMPQIGGQQGPPGLAAAGQVPLLEEPQRPPQN
Length363
PositionUnknown
OrganismOrnithorhynchus anatinus (Duckbill platypus)
KingdomMetazoa
Lineage
Aromaticity0.04
Grand average of hydropathy-0.331
Instability index55.14
Isoelectric point10.14
Molecular weight38047.22
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27337
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     163.62|      27|      27|      68|      94|       1
---------------------------------------------------------------------------
    1-   34 (27.29/ 6.55)	PPLLAH..PQVSSNLSAAQVAAQ...........naV....EAAKnqkagL
   35-   73 (30.72/ 8.28)	GPRFSPitP.LQST.TSGVG.PPfsqasapqmapgaP....GAPK.....L
   74-  103 (45.51/15.70)	PPTASQ..PNLVSTVTTGSGLAP..........qpqP....GAPS.....L
  104-  125 (27.10/ 6.45)	P.TGVA..PGGVSA.......AP...........qaP...iGAPQ.....L
  314-  341 (33.00/ 9.42)	PPLSSP..PSPSS..S..SSLPP............pPmpqiGGQQ.....G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.78|      26|      26|     208|     233|       2
---------------------------------------------------------------------------
  208-  233 (45.22/37.87)	VQF.HFTNKDLESLKGLYRIMGNGFAG
  235-  261 (40.56/33.18)	VHFpHTAPCEVRVLMLLYSSKKKIFMG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.75|      15|      23|     159|     173|       4
---------------------------------------------------------------------------
  159-  173 (28.31/16.74)	KLTRSL.PCQVYVNPG
  184-  199 (21.44/10.94)	KLIMQLiPQQLLTTLG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27337 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) HKQVQQHKLEQQQQQRGVRVRPAASPPGGGVRPPPLSSPPSPSSSSSLPPPPMPQIGGQQGPPGLAAAGQVPLLEEPQRPPQN
2) PPLLAHPQVSSNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQSTTSGVGPPFSQASAPQMAPGAPGAPKLPPTASQPNLVSTVTTGSGLAPQPQPGAPSLPTGVAPGGVSAAPQAPIGAPQLPG
281
1
363
127










Molecular Recognition Features






MoRF SequenceStartStop




1) GLAAAGQVPLLEEPQRPPQN
344
363