<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27294
Description |
mediator of RNA polymerase II transcription subunit 26-like isoform X1 |
Sequence | MPPTVVQLTHRLLQIINKDGTISDQDVALEIIAMLETTVISCEELEETRLGKYINDVRRAATDTSIQRRAKKLIKTWQQMIQVKKRPKTVPEVVAAKTKPVGKPKQAQRTTKQTIVNGEKPNKQRNNSPAKPNEKNKIISKNAKPKVPEIRDSENNQSNNFTCMTNGLKVTFSNLPTKSPSNNISMKHPTKRKRTDENQDFVAKSEKIPAKNNTNISSISLSNVTKVNDVTKTSLETREVTATKTENVNHKPSSPNIEAKTLSDAGEPGSLPRGIDTKDSGPGTSDERPGIDGCRTNNGLWFSWQDGISVQRADLFETNDQDDILTILPYIELD |
Length | 334 |
Position | Unknown |
Organism | Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Tunicata> Ascidiacea> Phlebobranchia>
Cionidae> Ciona.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.853 |
Instability index | 44.78 |
Isoelectric point | 9.43 |
Molecular weight | 37177.58 |
Publications | PubMed=12481130
PubMed=15114417
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Function
Annotated function |
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
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GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | positive regulation of gene expression GO:0010628 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP27294
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 184.13| 48| 48| 200| 247| 1
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113- 160 (55.13/27.50) QTIVNGEKpnkqrnnSPAKPNEKNKIISKNAKPKVPEI.................RDSENNQSNN
200- 247 (73.64/39.09) DFVAKSEK.......IPAKNNTNISSISLSNVTKVNDVTK..........TSLETREVTATKTEN
249- 298 (55.36/27.64) NHKPSSPN.......IEAK........TLSDAGEPGSLPRgidtkdsgpgTSDERPGIDGCRTNN
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