<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27261

Description Prostate tumor overexpressed 1
SequenceMRSPAVPTPARGQLGVAFVLLPPRLVGNPAPATPPEVVARASSQALPPCSPPCGPRQLPARSARARHGPSAPCPVPLRRRGPPRGSRPPPAAPRSARCPLALLEGARVFGALGPISPSSPGLTLGGLAVSEHRLSNKLLAWSGVLEWQEKRRPYSDSTAKLKRTLPCQAYHPHAWLTQLSVPCPPQTTLGPLFRNSQLAQFHFTNRDCDSLKGLCRIMGNGFAGCMLFPHISPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVSAIRQVITTRKQAVGPGGVNSGPVQIVNNKFLAWSGVMEWQE
Length304
PositionUnknown
OrganismMacaca mulatta (Rhesus macaque)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.159
Instability index59.94
Isoelectric point10.74
Molecular weight32710.85
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27261
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.31|      25|     152|     121|     149|       1
---------------------------------------------------------------------------
  121-  149 (41.61/44.15)	GLTLGGLAVsehrLSNKLLAWSGVLEWQE
  280-  304 (50.70/40.25)	GVNSGPVQI....VNNKFLAWSGVMEWQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     104.18|      22|      22|      52|      73|       2
---------------------------------------------------------------------------
   31-   49 (34.40/13.47)	PATP...PE..VVAR............ASSQALPPC
   52-   73 (46.92/20.99)	PCGPRQLPA..RSAR............ARHGPSAPC
   83-  117 (22.86/ 6.56)	PRGSRPPPAapRSARcplallegarvfGALGPISP.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.07|      13|     173|       6|      18|       4
---------------------------------------------------------------------------
    6-   18 (24.57/10.24)	VPTPARGQLGVAF
  181-  193 (27.50/12.26)	VPCPPQTTLGPLF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27261 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PRLVGNPAPATPPEVVARASSQALPPCSPPCGPRQLPARSARARHGPSAPCPVPLRRRGPPRGSRPPPAAPRSAR
23
97










Molecular Recognition Features






MoRF SequenceStartStop




1) ARGQLGVAFVLL
10
21