<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27199

Description Uncharacterized protein
SequenceMAFKLAKGWHEQANIARSYLDRATRKIKKWADKKRCHIEYKAGDMVLVKLLPQQFKSLRLMHKGLVRRYEGPFSILRKVAKVSYKVELPPRLKIHPIFHVSYLKPYHEDKNDPSRGLSKRAPTTVVTSYDKEAPRSQFQLSPEIHDSNASVSNEILNNSAKLGRATKILAAASALVIGAVIHGVISLERMVAVFRLKEGLDVIQFIRSTRYKSNGNPRSLGAFKVDNSVEVCVHWFRLLIGNCKTVCDGLVVDLMGEPSIVALSRMQRTLPLNLVFPPAYSIFSFVVWRPFILNANITNREDIHQLYQSLTMAISDATKHLPFLDVCMRDTHSFYDLVAVDASDSEFAAMLELNGPDLHLRAMTFVHLRARLFLNAIIDCKMPNTLFTQDDVNWVSEHAESKVPYAENETKLLDKLVHILDTLQPAKFHWQWVELRLLLNEQALVEKLNNHDVSLAEAIHSISPNPEKTVASMNENNFILIILTRLLVWPYAATLFSEVVHLFGRSLADSTLLQAKWIFGSLDPVATKGDKKKFEVTSLEEGEVVEEDQSSDDSRNAFASDLIKQRHIIEQQINTVTRGTTKQAGAVLSGVEGPANKGNKRKGMRGGNPGLARRPTGVADSARPSPAALRASMALGLQFLLRLLPIICAEGMTWIACNCIRWRIQAAMPILVPSGRCSISCQPPSVSSAALASLQPSLSFPAFHPGNTNQSQRNSSSLVRPGKLKNMPLQQDHDIEIDPWRQLEDGAGAGPSSGNTAVIGSGDHANLRASKWLRGTVRVRRTDLTYIGAADDDS
Length794
PositionKinase
OrganismVitis vinifera (Grape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> Vitales> Vitaceae> Viteae> Vitis.
Aromaticity0.07
Grand average of hydropathy-0.180
Instability index48.33
Isoelectric point9.28
Molecular weight88350.71
Publications
PubMed=17721507

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27199
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.27|      15|      15|      70|      84|       1
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   70-   84 (25.75/11.27)	EGPFSI.LRKVAKVSY
   87-  102 (24.52/10.48)	ELPPRLkIHPIFHVSY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     115.35|      41|      64|     360|     403|       2
---------------------------------------------------------------------------
  360-  403 (62.85/63.05)	LRAMTF....VHLRarLFLN..AIIDcKMPN.TLFTQDDVNWVSEHAESKV
  423-  470 (52.50/39.29)	LQPAKFhwqwVELR..LLLNeqALVE.KLNNhDVSLAEAIHSISPNPEKTV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.06|      23|      67|     511|     533|       3
---------------------------------------------------------------------------
  511-  533 (40.21/28.49)	TLLQAKWIFGSLDPVATKGDKKK
  580-  602 (38.84/27.26)	TTKQAGAVLSGVEGPANKGNKRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.59|      14|      22|     645|     666|       4
---------------------------------------------------------------------------
  645-  658 (29.10/30.08)	PIICAEGMTWIACN
  669-  682 (27.50/ 9.48)	PILVPSGRCSISCQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27199 with Med12 domain of Kingdom Viridiplantae
Unable to open file!