<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27169

Description Uncharacterized protein
SequenceMGNFLWSEVFCVFGYPTLFNQRVVEALKSCQERREPPLIWVTEVVECVESAGLVLPSVELGQVLVSQLCFTQNSPSRWKFLDHAISCGLLSHFHVLSQLTSRIIPHRWSQPEAYRLYLELLSRYAFSFHPVEPDASKERIIKSVDAALQLSKTYQVHVLELGHTMVLFFFSIVVGLLDSTLDDWGLPVTFLDRASGVARSGDYLNMDIDSKGNKNFKQSEHREQMRRTNSFLAMEVLGTLMENRKAKVLLRLVHLNMPEGFNGLLRRIQFLEAHKLASSILKSANQLLVRLSANIRGVLDFEYQLNKHQLIGMLIDIGSNKLVSGCNFEAVQSACWVPFDIYMENVMDVKHLPVRSTIVILRETIRTLQGFNRASWQETFLALWLSALRLVQRERDPLEGPIPHLESRLCMLLSIAPLAITQLLEDEVNSCNSSSQGGREYGYTEIGYGHEMDRKCHASRKHGLISSLQVLGHFSALLCPPSSIADAANLAAAKAAGFISNSKNGKDSLGGGSHGNTIVKSGGNMRHLIVEACIARKLIDTSAYFWPGYVSASVISMSDSSPIQGSPWSTFMEGAPLTGPLIDALIAIPASSLAELEKLYHVALNGSEEEKSAAAKILCGASLRRGWNIQEHVVHSMVKLLSPPIPPNFTGTRSHLIDYLPMLSAILFGASSIDTVHILSLHGVVPEVAAALMPLCEAFGSVTPTSNHKSSMGDELSIYMVFSSAFLFLLRLWKFYKPPLEQCISGRGRAIGSELTLEYLLILRNNRIASHNSAAHDETSSSLNRIESTSDKPVYIDSYPKLRAWYCQNRSCIASTLSGLCNGSPVHQVANKILNMIYWKMTKSGASSGNPSTPSGSSISGSTASTGEDAYQRPMLPAWEVLEAVPLVLEAILTACAHGILSSRDLTTGLRDLVDFLPASLVVIISYFSAEVSRGIWKLVPMNGKDWPSPAANLLSVESEIKEILAAIGVDAPRCSPGDSTAMLPLPMAALVSLTITFKLDKRLEYIHAVAGTSLANCASSCPWPSMPIIGSLWVQKVRRWHNFIVGSCSLSVFRQDKEAVAQLLRSCFTSFLGLFHVSKSPLASQNGVVGLLGDINWAHCVCPSIAPGLLYLRSCRTIHNVQYVNHVIIGLVAEFARELASRWASKDSQQLKSSQSSLALATTKVKEVATLGASLLCVTGGIQLVQELYQETLPTWLLSTREEKLGEVSSVSRIMEGYAMAYLLVLSGSFIWGLGARPPSWTFSIRARIVRTHLDFLAGVLEGNISLGCDPATWKSYVSCLVGLLVSLAPTWIRDVKRETLRKLANGLRGWHECELALSLLEKGGPATLGSAAELVNKYDNLT
Length1344
PositionTail
OrganismVitis vinifera (Grape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> Vitales> Vitaceae> Viteae> Vitis.
Aromaticity0.08
Grand average of hydropathy0.120
Instability index45.41
Isoelectric point7.98
Molecular weight147494.73
Publications
PubMed=17721507

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27169
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     294.35|      74|      75|     435|     509|       1
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  404-  472 (107.38/61.44)	HLESRLCMLLSIAP...LAITQLLEDEVNSC.N...........ssSQ.GGREYGYTEIGYG....HEMDRK......CHASRKHGLISSLQVL..G
  473-  548 (98.17/55.52)	HFSALLCPPSSIADAANLAAAKAAGFISNSK.NGK..DS.........lGGGSHGNTIVKSGgnmrHLIVEA......CIA.RK..LIDTSAYFwpG
  549-  635 (88.79/50.73)	YVSASVI...SMSDSSPIQGSPWSTFMEGAPlTGPliDAliaipasSL.AELEKLYHVALNG....SEEEKSaaakilCGASLRRGWNIQEHVV..H
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     185.30|      59|      76|     979|    1043|       2
---------------------------------------------------------------------------
  979- 1043 (92.21/61.73)	DSTAMLPLPMAALVSLTITFKLDKR.LEYIHAVAG....TSLANCAssCpwPSM.PiiGSLWVQKVRRWHN
 1057- 1121 (93.09/46.68)	DKEAVAQLLRSCFTSFLGLFHVSKSpLASQNGVVGllgdINWAHCV..C..PSIaP..GLLYLRSCRTIHN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.11|      22|      74|     867|     895|       4
---------------------------------------------------------------------------
  877-  948 ( 7.67/11.84)	PAWEVLeAVPLVLEAILTAcahgilssrdlttglrdlvdflpaslvviisyfsaevsrgiwklvpmnGKDwP
  950-  973 (28.45/13.13)	PAANLL.SVESEIKEILAA...............................................iGVDaP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     152.64|      35|      95|    1195|    1229|       7
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 1195- 1229 (55.86/37.73)	PTWLLSTREEKL.GEVSSVSRIMEGYA.........MAYLLVLSG
 1240- 1284 (42.05/26.27)	PSWTFSIRARIVrTHLDFLAGVLEGNIslgcdpatwKSYVSCLVG
 1291- 1325 (54.73/36.79)	PTWIRDVKRETL.RKLANGLRGWHECE.........LALSLLEKG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27169 with Med33 domain of Kingdom Viridiplantae
Unable to open file!