<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27167
Description |
Uncharacterized protein |
Sequence | MAPLLKDASVEFPRDVRKCNLQSSHNTNNQYLEHNLPHQNLGETNSSYSETASCRGNSFRSGSACAENAGREGGQNETKPSMLYNSHIQVVGQSSGTCNVHTGQVKELVGAFPNGTDDDDILEDIDVDQIVMEHYQSTCTPQPSISKLPPVTPTLSTVNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDMLIVISNELLDNVDLTSVQVEKLRQDRLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTTPWAQFQTPPATAVGIDPMRFDAQVHLRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALISPGITLVISPLVSLIQDQIMHLLQANIPAAYLSASMEWNEQQEILRELSSCKYKLLYATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVLPKTRKCLDDIDKFIRENHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDPARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCLKIKSFVEKDVTEIAKQLVELVKLTREQFSSSHILEVYRGSLSQYVKKHRHETLGLHAAGKHLAKGEASRILRHLVTEDFLMEDVKKSDIYGSVSSVLKVNESKVYKLFSGGQKIILRFPSSAKSSKLSNFEATPAKGSLTSGKLSPPRIETPAHLPEVDLNLSAKLYSALRILRTVLVKEAGEGVMAYHIFGNATLQQISKRIPRTKEELLEVNGIGKAKISKYGDRVLETIESTIKEYYKTDKNSSSSNDSTDTIKRRRESAKVLDANPEDDDFTKSTDRSRGRAMKRHNKGGEANNTRETDYYNQCIDDDLDFDDANCDVAINGSAPKVDRDGARRTLPSWSTPSNKGHDQHLNMFQEYSFKGTHIKAGKMKDVGQFAVAIEFVLVFLL |
Length | 1157 |
Position | Unknown |
Organism | Vitis vinifera (Grape) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> Vitales> Vitaceae> Viteae> Vitis.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.473 |
Instability index | 44.06 |
Isoelectric point | 7.09 |
Molecular weight | 129855.54 |
Publications | PubMed=17721507
|
Function
Annotated function |
|
GO - Cellular Component | chromosome GO:0005694 IBA:GO_Central
cytoplasm GO:0005737 IBA:GO_Central
nucleus GO:0005634 IBA:GO_Central
plasmodesma GO:0009506 IEA:EnsemblPlants
|
GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IBA:GO_Central
ATP binding GO:0005524 IEA:UniProtKB-KW
four-way junction helicase activity GO:0009378 IBA:GO_Central
nucleic acid binding GO:0003676 IEA:InterPro
|
GO - Biological Process | cellular response to abscisic acid stimulus GO:0071215 IEA:EnsemblPlants
cellular response to cold GO:0070417 IEA:EnsemblPlants
DNA duplex unwinding GO:0032508 IBA:GO_Central
DNA recombination GO:0006310 IBA:GO_Central
DNA repair GO:0006281 IBA:GO_Central
DNA unwinding involved in DNA replication GO:0006268 IBA:GO_Central
double-strand break repair via homologous recombination GO:0000724 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP27167
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.73| 15| 18| 887| 901| 2
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887- 901 (26.18/13.21) SAKSSKLSNFE.ATPA
904- 919 (23.55/11.25) SLTSGKLSPPRiETPA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 147.08| 47| 96| 541| 587| 3
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541- 587 (88.19/52.87) C..................................IIFRQSFNRPNLWYSV...LPKTRK.CLDDIDKFIRENHFDECGIIYCLS
601- 685 (58.89/33.03) CghkaafyhgsmdparrafvqkqwskdeiniicatVAFGMGINKPDVRFVIhhsLPKSIEgYHQECGRAGRDGQRSSCVLYYSYS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.24| 20| 21| 1026| 1046| 4
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1026- 1046 (29.30/25.26) RESA.KVLDANPEDDDfTKSTD
1049- 1069 (30.94/20.57) RGRAmKRHNKGGEANN.TRETD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.06| 21| 21| 771| 791| 5
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771- 791 (32.04/24.14) FVEKDVTEIAK.QLVELVKLTR
794- 815 (31.01/23.11) FSSSHILEVYRgSLSQYVKKHR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.82| 17| 23| 958| 974| 7
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958- 974 (28.30/18.08) GNATLQQISKRIPRTKE
983- 999 (27.52/17.39) GKAKISKYGDRVLETIE
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