<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27158

Description Uncharacterized protein
SequenceMAVSVHTSIWDNILEHTNVAQEKGSDPLLWAVQLSSSLSSAGVSLPSVEVANLLVSHICWGNNVPIAWKFLEKALMIKIVPPMPVLALLSTRVIPSRHSRPTAYRLYLELIKRHAFTLKSLIDGPNYQKDMKFIDSVLHLSLAFGLQASEPGILVVEFIFSMVLMLLDASLDDEGLIELTPEKKSKWANDMEIDSHDDYDEKRTDLHERLQKINTVMAIDLIGQFLQNKATSKILYLARRNMPTHWVVFLQRIQLLGANSSALRNSKVITPEALLHLTSDTRIVLSRKCKSSSLQKFHAVMAFGSLASSAGLCHGASRSALWLPLDLVLEDAMDGSLVSATSAIETITGLIKVLQAINGTTWHDTFLGLWIAALRLVQRERDPIEGPMPRLDTRLCLLLSITTLVVADLIEEEESAPNDETERHPTNHWKEKHVPGKCRKDLVSSLQMLGDYEGLLTPPQSVISAANQAAAKAMMLVSGINVGSAYFEFISMKDMPINCSGNMRHLIVEACIARNLLDTSAYFWPGYVNGRINQIPHSIPPQVLGWSSFMKGAPLSPVMINALVSTPASSLAELEKVFEIAVRGSDDEKISAATILCGASLIRGWNIQEHIVHFITRLLSPPVPADYSGSDSHLIAYAPMLNILLVGIASVDCVQIFSLHGLVPHLAGSLMPICEVFGSCVPNVSWTLTTGEEINAHAIFSNAFTLLLKLWRFNHPPLEHGVGDVPPVGSQLTPEYLLLVRNSHLVSSGTIHNRNKTRFSGVASSSSEQPIFLDSFPKLKVWYRQHQACIASTLSGLVHGTPVHQIVDGLLNMMFRKINRGSQSLSSVTSGSSSSSGPGSDDPLRPKLPAWDILEVVPFVVDAALTACAHGRLSPRELATGLKDLADFLPASLATIISYFSAEVTRGVWNPVFMNGTDWPSPAANLSNVEEQIRKILAATGVDVPSLAAGGNSPATLPLPLAAFASLTITYKIDRASQRFLNLAGPALEALAADCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLHNSDAVVQLLKSCFTATLGLKTTPISSNGGVGALLGHGFGSHFCGGISPVAPGILYLRAYRSIRDVVFMAEEIVSLLMHFVREIASSQLSGERSEKLKKAKNEMKYGQISLGAALARVKLIASLAASLVWLSGGLGLVQSLIKETLPSWFISVHRSEQEEGSGGMVAMLGGYALAYFTVLCGAFVWGVDSSSSASKRRPKILGSHMEFLASALDGNISLGCDCATWRAYVSGFVSLMVGCTPTWVLEVDVNVLKRLSKGLRQWNEEELALALLGIGGVGTMAAAAELIIETEI
Length1321
PositionTail
OrganismVitis vinifera (Grape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> Vitales> Vitaceae> Viteae> Vitis.
Aromaticity0.07
Grand average of hydropathy0.209
Instability index42.71
Isoelectric point6.57
Molecular weight143349.34
Publications
PubMed=17721507

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:EnsemblPlants

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27158
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     269.00|      82|     160|     985|    1070|       1
---------------------------------------------------------------------------
  758-  815 (62.69/30.97)	.........................................RFS............GVASSSSEQPIFLDSFPKLkvwYRQHQACIAS..TLsGLvHGTPVHQI..VDGLLNMMF
  831-  916 (62.54/33.31)	GSSSSSgPGSDDPLrPKLPawdilevvpfVVDAALTACAHgRLSprelatglkdlaDFLPASLATII................SYFSAevTR.GV..WNPVFMNG..........
  985- 1067 (143.77/98.21)	GPALEA.LAADCPW.PCMP..........IVASLWTQKAK.RWS............DFLVFSASRTVFLHNSDAV...VQLLKSCFTA..TL.GL.KTTPISSNGgVGALLGHGF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     132.15|      42|     157|     138|     180|       2
---------------------------------------------------------------------------
  138-  180 (66.93/41.16)	LHLSLAFGLQASEPGiLVVEFIFSMVLMLLDASLDD..EG.LIELT
  297-  341 (65.21/36.02)	FHAVMAFGSLASSAG.LCHGASRSALWLPLDLVLEDamDGsLVSAT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     253.15|      82|     587|     594|     725|       6
---------------------------------------------------------------------------
  476-  592 (120.27/84.24)	LVSGINVGSAYFEFIS...MKDMPINCSGNMRHLIVEACIARNLL......DTSAYFWpgyVNGRINQIphsippqvlgwssfmkgaplspvminalvstpASSLAELEKVFEIAVRG.....SDDEKISA
  601-  696 (132.89/152.21)	LIRGWNIQEHIVHFITrllSPPVPADYSGSDSHLIAYAPMLNILLvgiasvDCVQIFS...LHGLVPHL................................AGSLMPICEVFGSCVPNvswtlTTGEEINA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.91|      23|      93|    1158|    1181|       8
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 1158- 1181 (37.37/26.56)	WLSGGLGLVqSLIKETLPSWFISV
 1254- 1276 (44.54/27.32)	WRAYVSGFV.SLMVGCTPTWVLEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.76|      30|     101|    1108|    1143|       9
---------------------------------------------------------------------------
 1108- 1143 (38.66/46.14)	FVREIASSQLSGERSEKLkkAKNEMKYgqisLGAAL
 1212- 1241 (52.10/39.30)	FVWGVDSSSSASKRRPKI..LGSHMEF....LASAL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27158 with Med33 domain of Kingdom Viridiplantae
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